RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CCNCP24863 283 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 FMO4P31512 558 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 KRT6CP48668 564 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 FAM187BQ17R55 369 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TIGD2Q4W5G0 525 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 C9orf57Q5W0N0 161 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ARHGAP36Q6ZRI8 547 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 DEPDC7Q96QD5 511 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 BTBD3Q9Y2F9 522 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
DNMT1-203ENST00000540357 HSMCR30P0CW71 290 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 BCAP31P51572 246 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-203ENST00000540357 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TOP6BLQ8N6T0 577 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 NODALQ96S42 347 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 GPR20Q99678 358 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 TBCDQ9BTW9 1192 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 LMCD1Q9NZU5 365 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 IFT80Q9P2H3 777 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ENOPH1Q9UHY7 261 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 OAZ3Q9UMX2 235 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 COL18A1P39060 1754 aa13.03□□□□□ -0.32
DNMT1-203ENST00000540357 ZBTB14O43829 449 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 THP07101 528 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 CD86P42081 329 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 IL2P60568 153 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 MAPKAPK3Q16644 382 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 MZB1Q8WU39 189 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PROX1Q92786 737 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 MYDGFQ969H8 173 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 OLA1Q9NTK5 396 aaKnown RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 TAF4O00268 1085 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 SEC22BO75396 215 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 ECT2LQ008S8 904 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 PAGE2Q7Z2X7 111 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 ZC3HC1Q86WB0 502 aaKnown RBP13.02□□□□□ -0.32
DNMT1-203ENST00000540357 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.32
DNMT1-203ENST00000540357 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF701M0R085 212 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-203ENST00000540357 CDK4P11802 303 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 DDX5P17844 614 aaKnown RBP13.02□□□□□ -0.33
DNMT1-203ENST00000540357 ATP4BP51164 291 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 TAS2R39P59534 338 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 TEKT5Q96M29 485 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 CLPBQ9H078 707 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 REEP1Q9H902 201 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 RAMP2O60895 175 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 CLPXO76031 633 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 CPOXP36551 454 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 ATXN1P54253 815 aaKnown RBP13.02□□□□□ -0.33
DNMT1-203ENST00000540357 TMBIM6P55061 237 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 WNT3AP56704 352 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF460Q14592 562 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.33
DNMT1-203ENST00000540357 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
DNMT1-203ENST00000540357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
DNMT1-203ENST00000540357 CCDC162PA2VCL2 907 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 ARPC2O15144 300 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 NDUFS2O75306 463 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 IMPDH1P20839 514 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 MAGEA6P43360 314 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 EEFSECP57772 596 aaKnown RBP13.01□□□□□ -0.33
DNMT1-203ENST00000540357 DNAJB13P59910 316 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 TWF1Q12792 350 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-203ENST00000540357 C10orf120Q5SQS8 335 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 KIAA0930Q6ICG6 404 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-203ENST00000540357 ANKFN1Q8N957 763 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 TRPV3Q8NET8 790 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 STYXQ8WUJ0 223 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 CHID1Q9BWS9 393 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
DNMT1-203ENST00000540357 ADAMTS10Q9H324 1103 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 AP1G1O43747 822 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 CAPN15O75808 1086 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF605Q86T29 641 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 GPRC5AQ8NFJ5 357 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 NUAK2Q9H093 628 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 GMIPQ9P107 970 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
DNMT1-203ENST00000540357 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms