RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 STX1BP61266 288 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 ECT2LQ008S8 904 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 GSTM4Q03013 218 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 ALKAL1Q6UXT8 129 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 CENPNQ96H22 339 aaPredicted RBP13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 TEX37Q96LM6 180 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 TMEM74Q96NL1 305 aa13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 PPP1R10Q96QC0 940 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
SCNN1A-215ENST00000540037 A0A087X1B8 175 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 C1orf232A0A0U1RR37 186 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 PIP5K1BO14986 540 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 LTA4HP09960 611 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 EEF1B2P24534 225 aaKnown RBP13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 BCAP31P51572 246 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 DAOAP59103 153 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 NR1D2Q14995 579 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 PSMD5Q16401 504 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 GALNT18Q6P9A2 607 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 ABRAXAS1Q6UWZ7 409 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 LINC00523Q86TU6 105 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 SNX29P2Q8IUI4 249 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 SEPT8Q92599 483 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 PTERQ96BW5 349 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 VPS50Q96JG6 964 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 FANCEQ9HB96 536 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 WDR90Q96KV7 1748 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 RASAL1O95294 804 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 LINC00032P0C843 101 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 CASP2P42575 452 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 DIO3P55073 304 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 LILRA4P59901 499 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 POU4F1Q01851 419 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 ITGADQ13349 1161 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 KCTD2Q14681 263 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 UNC50Q53HI1 259 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 FAM117BQ6P1L5 589 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 DHRSXQ8N5I4 330 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 PCYOX1LQ8NBM8 494 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 TNIP3Q96KP6 325 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 CSF3RQ99062 836 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 C9orf16Q9BUW7 83 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 TREX1Q9NSU2 369 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 IFT80Q9P2H3 777 aaPredicted RBP13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 ABCD2Q9UBJ2 740 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF232Q9UNY5 417 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 RAD54BQ9Y620 910 aa13.94□□□□□ -0.18
SCNN1A-215ENST00000540037 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF701M0R085 212 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ANGPT2O15123 496 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC4A1P02730 911 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 GFAPP14136 432 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 MAP4P27816 1152 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 INPP5AQ14642 412 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 GRIK4Q16099 956 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 AGAP9Q5VTM2 703 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ARRDC4Q8NCT1 418 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 RNF34Q969K3 372 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ZUFSPQ96AP4 578 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 FAR2Q96K12 515 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 MUS81Q96NY9 551 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 SMOQ99835 787 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 FSD1LQ9BXM9 530 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 CRTAC1Q9NQ79 661 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 SMPD3Q9NY59 655 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 GPRC5DQ9NZD1 345 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 UBQLN1Q9UMX0 589 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 CRYL1Q9Y2S2 319 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 H3BRB1 525 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 MTSS1O43312 755 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 HLA-DQB2P05538 268 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 CAPGP40121 348 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 TAF6P49848 677 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 PIGFQ07326 219 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 SCAPQ12770 1279 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 PLA2G4EQ3MJ16 856 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 DCAF4L1Q3SXM0 396 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 EGFLAMQ63HQ2 1017 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 TMEM214Q6NUQ4 689 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 SPRED1Q7Z699 444 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ZMIZ2Q8NF64 920 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ROPN1LQ96C74 230 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 GLOD4Q9HC38 313 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 DNAJC25-GNG10A0A024R161 153 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms