RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 GSTA1P08263 222 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ELFN1P0C7U0 828 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 COL6A2P12110 1019 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ZNF7P17097 686 aaPredicted RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 TPH1P17752 444 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 PTGER3P43115 390 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 SLC6A11P48066 632 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ZNF140P52738 457 aaPredicted RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 ADARP55265 1226 aaKnown RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 POU4F1Q01851 419 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ASPHQ12797 758 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 DBN1Q16643 649 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 C9orf64Q5T6V5 341 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ZNF470Q6ECI4 717 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 TIFABQ6ZNK6 161 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 CAPN12Q6ZSI9 719 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 ERN2Q76MJ5 926 aaKnown RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 DPPA4Q7L190 304 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 CYP2U1Q7Z449 544 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 NLRP8Q86W28 1048 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 C12orf40Q86WS4 652 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 PIP4K2CQ8TBX8 421 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 GRIN3AQ8TCU5 1115 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 CXorf40AQ8TE69 158 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 KLHL32Q96NJ5 620 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 OMDQ99983 421 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 DHRS4Q9BTZ2 278 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 RSPH9Q9H1X1 276 aaPredicted RBP11.8□□□□□ -0.52
VTN-202ENST00000539746 RHOJQ9H4E5 214 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 POPDC3Q9HBV1 291 aa11.8□□□□□ -0.52
VTN-202ENST00000539746 GLYATL1P3A0A0U1RQE8 302 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 C16orf96A6NNT2 1141 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
VTN-202ENST00000539746 LDB2O43679 373 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
VTN-202ENST00000539746 ESR1P03372 595 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 HOXB2P14652 356 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 NR1D1P20393 614 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 OXTRP30559 389 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 GRIA1P42261 906 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 ABL2P42684 1182 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 RGRP47804 291 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 LIMK2P53671 638 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 ITIH4Q14624 930 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 TMED2Q15363 201 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 CNGA3Q16281 694 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 INSCQ1MX18 579 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 GAB4Q2WGN9 574 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 HSP90AA5PQ58FG0 334 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 HP1BP3Q5SSJ5 553 aaPredicted RBP11.79□□□□□ -0.52
VTN-202ENST00000539746 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 KIAA1161Q6NSJ0 714 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 FAM45BPQ6NSW5 357 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 RBFAQ8N0V3 343 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 GJD3Q8N144 294 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 TTC8Q8TAM2 541 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 FAM45AQ8TCE6 357 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 MFSD3Q96ES6 412 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 ZNF419Q96HQ0 510 aaPredicted RBP11.79□□□□□ -0.52
VTN-202ENST00000539746 ZNF514Q96K75 400 aaPredicted RBP11.79□□□□□ -0.52
VTN-202ENST00000539746 ARHGEF3Q9NR81 526 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 FBXO5Q9UKT4 447 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 WASF2Q9Y6W5 498 aa11.79□□□□□ -0.52
VTN-202ENST00000539746 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 A0A087X1B8 175 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PABPN1LA6NDY0 278 aaKnown RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CHURC1-FNTBB4DL54 471 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 GPR89AB7ZAQ6 455 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 TOR1BO14657 336 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 WNT9AO14904 365 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 ZNF217O75362 1048 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 SNUPNO95149 360 aaKnown RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 PIGNO95427 931 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PRLP01236 227 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 GPR89BP0CG08 455 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 STMN1P16949 149 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CD9P21926 228 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 HNF1BP35680 557 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CHRNA4P43681 627 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 LEPRP48357 1165 aaKnown RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 NAA20P61599 178 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CRADDP78560 199 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CST6Q15828 149 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 TTLL9Q3SXZ7 439 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 TEDDM1Q5T9Z0 273 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PACS1Q6VY07 963 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 RNF135Q8IUD6 432 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CILP2Q8IUL8 1156 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms