RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DNAJA2O60884 412 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SASH3O75995 380 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 NTRK1P04629 796 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ITGA7Q13683 1181 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TEX44Q53QW1 395 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CNSTQ6PJW8 725 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 RASAL3Q86YV0 1011 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CYP4X1Q8N118 509 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 EFCAB3Q8N7B9 438 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PRCCQ92733 491 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MARK4Q96L34 752 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PANX1Q96RD7 426 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LRMDAQ9H2I8 198 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 VPS45Q9NRW7 570 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SSR3Q9UNL2 185 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SAMD4AQ9UPU9 718 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PCDHGB3Q9Y5G1 929 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ISM1B1AKI9 464 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MFN2O95140 757 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ANPEPP15144 967 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MANFP55145 182 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 USP46P62068 366 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 XIAPP98170 497 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LAPTM5Q13571 262 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TCEAL5Q5H9L2 206 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 FAM92BQ6ZTR7 304 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TBC1D21Q8IYX1 336 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DSELQ8IZU8 1212 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 FUKQ8N0W3 1084 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ASZ1Q8WWH4 475 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MYO19Q96H55 970 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 AIF1LQ9BQI0 150 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DGCR6LQ9BY27 220 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 BTBD3Q9Y2F9 522 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TRAF6Q9Y4K3 522 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SLC22A3O75751 556 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TPP2P29144 1249 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 S100GP29377 79 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PNLIPRP1P54315 467 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TAS2R40P59535 323 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DPYSQ14117 519 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 NOMO1Q15155 1222 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GRIK5Q16478 980 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 NDUFA5Q16718 116 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TAPT1Q6NXT6 567 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 LLGL2Q6P1M3 1020 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CHPFQ8IZ52 775 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SMYD1Q8NB12 490 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ZBTB10Q96DT7 871 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PEAK1Q9H792 1746 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 A0A1W2PQH9 124 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TGFB1I1O43294 461 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 IFNGP01579 166 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 APODP05090 189 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CAPN1P07384 714 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ITGB5P18084 799 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 IGFBP4P22692 258 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GABRR2P28476 465 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ICAM3P32942 547 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 YBEYP58557 167 aaPredicted RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DUSP4Q13115 394 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CHADLQ6NUI6 762 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TMC5Q6UXY8 1006 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CERS6Q6ZMG9 384 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 UBASH3BQ8TF42 649 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 PPCDCQ96CD2 204 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 MAGEL2Q9UJ55 1249 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ARFGEF2Q9Y6D5 1785 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 ATG13O75143 517 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 SH3BGRLO75368 114 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 WFS1O76024 890 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GLUD1P00367 558 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 DRD4P21917 467 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 CCL23P55773 120 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TARBP2Q15633 366 aaKnown RBP6.49□□□□□ -1.37
LSAMP-207ENST00000539563 UGCGQ16739 394 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 BPIFB6Q8NFQ5 453 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 GPR20Q99678 358 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 FNDC11Q9BVV2 318 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 EXO5Q9H790 373 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 OR10H1Q9Y4A9 318 aa6.49□□□□□ -1.37
LSAMP-207ENST00000539563 TCRBV9S1A1TA0A576 114 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 KRT33AO76009 404 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CALCAP01258 141 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CTPS1P17812 591 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PTPN9P43378 593 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 EIF2B2P49770 351 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ADARP55265 1226 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 WNT3AP56704 352 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 MAXP61244 160 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 OLR1P78380 273 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SMAD3P84022 425 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 BST1Q10588 318 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC26A9Q7LBE3 791 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms