RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PRKCQQ04759 706 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 TRIM32Q13049 653 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 TRIM25Q14258 630 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 FASTKQ14296 549 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 DSC3Q14574 896 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 PLA2G4EQ3MJ16 856 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 FUT11Q495W5 492 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 KDELC1Q6UW63 502 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 TFAP2DQ7Z6R9 452 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 PARP8Q8N3A8 854 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 PPHLN1Q8NEY8 458 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 FNDC8Q8TC99 324 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 NSMCE4AQ9NXX6 385 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 SELENONQ9NZV5 590 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 FBXO5Q9UKT4 447 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 DSEQ9UL01 958 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 H3BNH8 94 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 TRIM38O00635 465 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 ZNF623O75123 536 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 CCDC166P0CW27 439 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 NCK1P16333 377 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 WNT3AP56704 352 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 BRMS1LQ5PSV4 323 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 GPR141Q7Z602 305 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 ANKRD49Q8WVL7 239 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 ISOC1Q96CN7 298 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 ADAM2Q99965 735 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 FSD1LQ9BXM9 530 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 SLC2A11Q9BYW1 496 aa12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 LAMA2P24043 3122 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-208ENST00000539506 SDHDO14521 159 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 GPR182O15218 404 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 PSMD3O43242 534 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 CNTN5O94779 1100 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 MMP2P08253 660 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 MTHFD1P11586 935 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF23P17027 643 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 KCNC1P48547 511 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 GNA12Q03113 381 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 HABP4Q5JVS0 413 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 TMEM207Q6UWW9 146 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF280BQ86YH2 543 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF683Q8IZ20 524 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 RTL3Q8N8U3 475 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 OR13J1Q8NGT2 312 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 SMOXQ9NWM0 555 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 TADA2AO75478 443 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 DNAJB2P25686 324 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 CYP2C18P33260 490 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 APLP1P51693 650 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 GEMP55040 296 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 MLLT6P55198 1093 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC10A7Q0GE19 358 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 PMS2P3Q13401 168 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 DDR2Q16832 855 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ALFQ53S48 1182 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ERI1Q8IV48 349 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 GPR152Q8TDT2 470 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 MRPL46Q9H2W6 279 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 CATSPERBQ9H7T0 1116 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 LTB4R2Q9NPC1 389 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 ENTPD7Q9NQZ7 604 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 USP22Q9UPT9 525 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
SFSWAP-208ENST00000539506 LRRC14BA6NHZ5 514 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 AP3B1O00203 1094 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TBX18O95935 607 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ATP6V1B2P21281 511 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 EEF1B2P24534 225 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CD151P48509 253 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 CDK9P50750 372 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ARSDP51689 593 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SULT2A1Q06520 285 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 TUSC3Q13454 348 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC39A12Q504Y0 691 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 PATL1Q86TB9 770 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 SGCDQ92629 289 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 HMCESQ96FZ2 354 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 RANBP9Q96S59 729 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 HAUS8Q9BT25 410 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
SFSWAP-208ENST00000539506 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms