RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR2AK2Q8NG84 335 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF524Q96C55 264 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 PCYT2Q99447 389 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 FKRPQ9H9S5 495 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 KIF17Q9P2E2 1029 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 RCOR1Q9UKL0 485 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 FAF1Q9UNN5 650 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-209ENST00000539197 RRP7AQ9Y3A4 280 aaKnown RBP4.92□□□□□ -1.62
CCDC7-209ENST00000539197 SH2D7A6NKC9 451 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF500O60304 480 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-209ENST00000539197 MYOD1P15172 320 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 NAA25Q14CX7 972 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF667Q5HYK9 610 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 LCTLQ6UWM7 567 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF852Q6ZMS4 543 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 KCTD8Q6ZWB6 473 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 C1orf87Q8N0U7 546 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 OR10V1Q8NGI7 309 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 STAMQ92783 540 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 MKKSQ9NPJ1 570 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-209ENST00000539197 CARD8Q9Y2G2 431 aa4.91□□□□□ -1.62
CCDC7-209ENST00000539197 GOLGA6L9A6NEM1 432 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 IFNL4K9M1U5 179 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 KLK10O43240 276 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 ETFAP13804 333 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 PAX1P15863 534 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 NR1D1P20393 614 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 TERF1P54274 439 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 ISL1P61371 349 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 SGO1Q5FBB7 561 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 CCNYL2Q5T2Q4 361 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 SLC35E4Q6ICL7 350 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 FBXO46Q6PJ61 603 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-209ENST00000539197 CEACAM20Q6UY09 585 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 RNF113BQ8IZP6 322 aaKnown RBP4.9□□□□□ -1.63
CCDC7-209ENST00000539197 C17orf77Q96MU5 243 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 CD180Q99467 661 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 SNTG1Q9NSN8 517 aa4.9□□□□□ -1.63
CCDC7-209ENST00000539197 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 PATE4P0C8F1 98 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
CCDC7-209ENST00000539197 CHKAP35790 457 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
CCDC7-209ENST00000539197 KRT24Q2M2I5 525 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 GPATCH4Q5T3I0 446 aaKnown RBP4.89□□□□□ -1.63
CCDC7-209ENST00000539197 TAOK1Q7L7X3 1001 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 GPAT4Q86UL3 456 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 ADAD2Q8NCV1 583 aaKnown RBP4.89□□□□□ -1.63
CCDC7-209ENST00000539197 KLHDC9Q8NEP7 349 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 FBXL8Q96CD0 374 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 SIN3AQ96ST3 1273 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 PAGR1Q9BTK6 254 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 HCFC1R1Q9NWW0 138 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 ALKBH4Q9NXW9 302 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 OR2W1Q9Y3N9 320 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 STON1Q9Y6Q2 735 aa4.89□□□□□ -1.63
CCDC7-209ENST00000539197 BCAT2O15382 392 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-209ENST00000539197 PLIN1O60240 522 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 PCDH7O60245 1069 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 RRM1P23921 792 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 KRT2P35908 639 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
CCDC7-209ENST00000539197 TAF5Q15542 800 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 CCDC96Q2M329 555 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 ZC2HC1BQ5TFG8 222 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 SLC35F3Q8IY50 421 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
CCDC7-209ENST00000539197 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 MAPK1IP1LQ8NDC0 245 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 CMKLR1Q99788 373 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 BABAM1Q9NWV8 329 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 TMEM160Q9NX00 188 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 PEMTQ9UBM1 199 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 KCNK7Q9Y2U2 307 aa4.88□□□□□ -1.63
CCDC7-209ENST00000539197 MMP2P08253 660 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 INHBAP08476 426 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 AGAP20933 346 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 NOVP48745 357 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 EFNA5P52803 228 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 RAD23BP54727 409 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 TBL3Q12788 808 aaKnown RBP4.87□□□□□ -1.63
CCDC7-209ENST00000539197 PRKG1Q13976 671 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 C2orf68Q2NKX9 166 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 SRBD1Q8N5C6 995 aaKnown RBP4.87□□□□□ -1.63
CCDC7-209ENST00000539197 COG8Q96MW5 612 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 EYA3Q99504 573 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 RASSF1Q9NS23 344 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.87□□□□□ -1.63
CCDC7-209ENST00000539197 RIPOR2Q9Y4F9 1068 aa4.87□□□□□ -1.63
CCDC7-209ENST00000539197 BLOC1S5-TXNDC5H3BN57 136 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 CRLF1O75462 422 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
CCDC7-209ENST00000539197 KRT72Q14CN4 511 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 HERC6Q8IVU3 1022 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
CCDC7-209ENST00000539197 PLD5Q8N7P1 536 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms