RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ACCSQ96QU6 501 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 BDH2Q9BUT1 245 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.42
USP3-203ENST00000538686 DNAI2Q9GZS0 605 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 IL22Q9GZX6 179 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 FAM49AQ9H0Q0 323 aaPredicted RBP12.46□□□□□ -0.42
USP3-203ENST00000538686 PPA2Q9H2U2 334 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 NIPAL2Q9H841 368 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 ASNSD1Q9NWL6 643 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 SFMBT1Q9UHJ3 866 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 RAPGEFL1Q9UHV5 662 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.42
USP3-203ENST00000538686 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 CCDC78A2IDD5 438 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 H0Y858 1186 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 PLD2O14939 933 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 TBC1D4O60343 1298 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 INMTO95050 263 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 ALOX12P18054 663 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 MAGEA3P43357 314 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 MAGEA11P43364 429 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 IKZF1Q13422 519 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 GPAT3Q53EU6 434 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 COLEC12Q5KU26 742 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 CDH24Q86UP0 819 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 AMIGO1Q86WK6 493 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 TMEM199Q8N511 208 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 HOPXQ9BPY8 73 aaPredicted RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 EIF2AK1Q9BQI3 630 aaKnown RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 HSPBP1Q9NZL4 362 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 GMEB2Q9UKD1 530 aa12.45□□□□□ -0.42
USP3-203ENST00000538686 DIMT1Q9UNQ2 313 aaKnown RBP12.45□□□□□ -0.42
USP3-203ENST00000538686 FAM149AA5PLN7 773 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 CCDC154A6NI56 674 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 MRASO14807 208 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 GRID2O43424 1007 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 CPNE3O75131 537 aaKnown RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 SNRPB2P08579 225 aaKnown RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 HTR1AP08908 422 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ACADMP11310 421 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 HSD17B1P14061 328 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TFEBP19484 476 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TYK2P29597 1187 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 DSG3P32926 999 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 CYP2C18P33260 490 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 SHMT2P34897 504 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ETV6P41212 452 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 NOVP48745 357 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ALDH3A2P51648 485 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 VBP1P61758 197 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 FAPQ12884 760 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 IGSF11Q5DX21 431 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 KIF18BQ86Y91 864 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 FAM83FQ8NEG4 500 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 FLCNQ8NFG4 579 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ST13P5Q8NFI4 369 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 SLC22A17Q8WUG5 538 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 KLHL6Q8WZ60 621 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ISL2Q96A47 359 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ZHX1-C8orf76Q96EF9 292 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 OR51B5Q9H339 312 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 C1orf112Q9NSG2 853 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 POLR3BQ9NW08 1133 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 AFG3L2Q9Y4W6 797 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 METTL15A6NJ78 407 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 BBIP1A8MTZ0 92 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 NRP1O14786 923 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ATG13O75143 517 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TRIM3O75382 744 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 SOAT2O75908 522 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 COL6A1P12109 1028 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 MPSTP25325 297 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ACVR2AP27037 513 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 FMO4P31512 558 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 EVI2BP34910 448 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 EPHX2P34913 555 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TRIM23P36406 574 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 MLLT3P42568 568 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 MVKQ03426 396 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 DPY19L1Q2PZI1 675 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 FAM182AQ5T1J6 154 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TRMT10BQ6PF06 316 aaKnown RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms