RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 UNC5CO95185 931 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 PMLP29590 882 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 GRIA4P48058 902 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 MTA1Q13330 715 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 PSRC1Q6PGN9 363 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 LYSMD3Q7Z3D4 306 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 TREML1Q86YW5 311 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 ZNF366Q8N895 744 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 TXNDC5Q8NBS9 432 aaKnown RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 FBXO27Q8NI29 283 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 ITFG1Q8TB96 612 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 PIWIL2Q8TC59 973 aaKnown RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 SKA1Q96BD8 255 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 CATSPERZQ9NTU4 200 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 G3BP2Q9UN86 482 aaKnown RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 GOLGA8QA0A0J9YX86 632 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 GOLGA8OA6NCC3 632 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 GOLGA8NF8WBI6 632 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 DCTN3O75935 186 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 EPOP01588 193 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 JUNP05412 331 aaKnown RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 HNRNPLP14866 589 aaKnown RBP eCLIP14.14□□□□□ -0.156e-6■■□□□ 12.3
ACTN1-205ENST00000538545 CEBPBP17676 345 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 DCAF4L2Q8NA75 395 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 ZFYVE19Q96K21 471 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 LBHD1Q9BQE6 289 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-205ENST00000538545 BBS2Q9BXC9 721 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 ALG9Q9H6U8 611 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 OXSMQ9NWU1 459 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 IRAK3Q9Y616 596 aa14.14□□□□□ -0.15
ACTN1-205ENST00000538545 ANTXRLA6NF34 631 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 NEMP1O14524 444 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 ZBTB14O43829 449 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TRIM13O60858 407 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TGDSO95455 350 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 HSPA4LO95757 839 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 MESP2Q0VG99 397 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 RCN2Q14257 317 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 FUT11Q495W5 492 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 FAM217AQ8IXS0 508 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 UTP4Q969X6 686 aaKnown RBP14.13□□□□□ -0.15
ACTN1-205ENST00000538545 SLC7A6OSQ96CW6 309 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-205ENST00000538545 SLC30A3Q99726 388 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TDP1Q9NUW8 608 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 SSX2IPQ9Y2D8 614 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 PIKFYVEQ9Y2I7 2098 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
ACTN1-205ENST00000538545 KLHL2O95198 593 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 MC4RP32245 332 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 CREMQ03060 361 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 POM121L1PQ3SYA9 428 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 ZRANB3Q5FWF4 1079 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 ARL13AQ5H913 290 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-205ENST00000538545 LY6G5CQ5SRR4 150 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 CALML6Q8TD86 181 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 PPP4R1Q8TF05 950 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 STYXQ8WUJ0 223 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TSNARE1Q96NA8 513 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 TNFRSF12AQ9NP84 129 aa14.13□□□□□ -0.15
ACTN1-205ENST00000538545 LRRC14BA6NHZ5 514 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 DIAPH2O60879 1101 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 PTPN2P17706 415 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 ACVR1Q04771 509 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 PEX6Q13608 980 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 MPPE1Q53F39 396 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 RFLNAQ6ZTI6 216 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 TSPAN33Q86UF1 283 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 OR6Y1Q8NGX8 325 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 CYB5D2Q8WUJ1 264 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 PTERQ96BW5 349 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 C2orf49Q9BVC5 232 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 WDR55Q9H6Y2 383 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 IKZF3Q9UKT9 509 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 H3BMM5 538 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 RFXAPO00287 272 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 DNAJC8O75937 253 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 CLDN7O95471 211 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 ENO1P06733 434 aaKnown RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 GSTA1P08263 222 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 HADHAP40939 763 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 VIPR2P41587 438 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 ERFP50548 548 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 POU4F1Q01851 419 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 SLC9B1Q4ZJI4 515 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 PLCD4Q9BRC7 762 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 BRWD1Q9NSI6 2320 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 NLE1Q9NVX2 485 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-205ENST00000538545 ZDHHC2Q9UIJ5 367 aa14.12□□□□□ -0.15
ACTN1-205ENST00000538545 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms