RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MFN2O95140 757 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 BNIP2Q12982 314 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 LPIN1Q14693 890 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 MIIPQ5JXC2 388 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 SPESP1Q6UW49 350 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 ATAD1Q8NBU5 361 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 P2RY11Q96G91 374 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 SEMA3GQ9NS98 782 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 GMIPQ9P107 970 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 PTGFRNQ9P2B2 879 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 MKL2Q9ULH7 1088 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 MFHAS1Q9Y4C4 1052 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 GLYATL1P3A0A0U1RQE8 302 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 RGSL1A5PLK6 1076 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 BTBD19C9JJ37 291 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 SLC28A2O43868 658 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 ATG13O75143 517 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 MAPK11Q15759 364 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PCDH18Q9HCL0 1135 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 SNX15Q9NRS6 342 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 WTIPA6NIX2 430 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 MSI1O43347 362 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 RNASEH2AO75792 299 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PRNPP04156 253 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 FGFR3P22607 806 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 MYBPC1Q00872 1141 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 TCAIMQ8N3R3 496 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 FEM1CQ96JP0 617 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 C1orf50Q9BV19 199 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 KCTD5Q9NXV2 234 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 SH3GLB1Q9Y371 365 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 LOC100506127A0A0U1RQW1 187 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 BIRC5O15392 142 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PAPSS1O43252 624 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 UGT2B4P06133 528 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 EPHX1P07099 455 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 IDO1P14902 403 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 ADRA1BP35368 520 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PSMD8P48556 350 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 SF1Q15637 639 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 ARHGAP36Q6ZRI8 547 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 BTN2A1Q7KYR7 527 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 CHST9Q7L1S5 443 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 RTL3Q8N8U3 475 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 MYDGFQ969H8 173 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 AARSD1Q9BTE6 412 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 ACSS3Q9H6R3 686 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
SCARB1-205ENST00000538291 POLE3Q9NRF9 147 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PCDHB1Q9Y5F3 818 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PCDHGB3Q9Y5G1 929 aa16.83■□□□□ 0.28
SCARB1-205ENST00000538291 PRMT5O14744 637 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 AP5Z1O43299 807 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 DUSP11O75319 330 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 IGFALSP35858 605 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 SRSF11Q05519 484 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 BST1Q10588 318 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 NR1D2Q14995 579 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 KCNA10Q16322 511 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 NDUFA9Q16795 377 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 RP9Q8TA86 221 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 PYDC1Q8WXC3 89 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 OR52E6Q96RD3 313 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 CDK14O94921 469 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 MANFP55145 182 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 MSL3Q8N5Y2 521 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 TEX47Q8TBZ9 253 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 STK32AQ8WU08 396 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 MCM8Q9UJA3 840 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 H3BM21 787 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 TRIM38O00635 465 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 LRATO95237 230 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 LINC00032P0C843 101 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 SLC6A2P23975 617 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 CCNIQ14094 377 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ALKBH2Q6NS38 261 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 C12orf56Q8IXR9 622 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 PRELID2Q8N945 189 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 CD99L2Q8TCZ2 262 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.286e-8■■■■■ 36.1
SCARB1-205ENST00000538291 ART4Q93070 314 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ERGIC3Q9Y282 383 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 MRPS17Q9Y2R5 130 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 C5orf60A6NFR6 353 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ASNA1O43681 348 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 SPIBQ01892 262 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 AUHQ13825 339 aaKnown RBP16.82■□□□□ 0.28
SCARB1-205ENST00000538291 NRF1Q16656 503 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms