RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 KCTD3Q9Y597 815 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 MYO16Q9Y6X6 1858 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 ATP6AP2A0A1C7CYW4 349 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 ATP6AP2O75787 350 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 ARSAP15289 507 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 HLA-DPA1P20036 260 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 SUOXP51687 545 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 HUNKP57058 714 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 SH3BP2P78314 561 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 CDKL1Q00532 357 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 MYBPC1Q00872 1141 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 SERINC3Q13530 473 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 TRIP4Q15650 581 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 IRAK1BP1Q5VVH5 260 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 AP1ARQ63HQ0 302 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 FUNDC1Q8IVP5 155 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 BRSK1Q8TDC3 778 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 GMIPQ9P107 970 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 PCDHGB5Q9Y5G0 923 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 DNAJC15Q9Y5T4 150 aa16.04■□□□□ 0.16
CHMP1A-202ENST00000535997 FAM92AA1XBS5 289 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 OR51F1A6NGY5 319 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 BBIP1A8MTZ0 92 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 FGF1P05230 155 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 ASGR1P07306 291 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 GPX3P22352 226 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 MAGEA11P43364 429 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF549Q6P9A3 640 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 RAB44Q7Z6P3 723 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 PIM3Q86V86 326 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF280BQ86YH2 543 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 DDI1Q8WTU0 396 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 FEM1CQ96JP0 617 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF597Q96LX8 424 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SLC2A11Q9BYW1 496 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 AKTIPQ9H8T0 292 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 OLA1Q9NTK5 396 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 RIMKLBQ9ULI2 386 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 PADI4Q9UM07 663 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 PCDHB5Q9Y5E4 795 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SQORQ9Y6N5 450 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 CLGNO14967 610 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SRP72O76094 671 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 STAMBPO95630 424 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 EOMESO95936 686 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 GOT2P00505 430 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 TSPAN8P19075 237 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 GRK4P32298 578 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 GPR15P49685 360 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 TIAL1Q01085 375 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 DSC1Q08554 894 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 CST9Q5W186 159 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 OR9I1Q8NGQ6 314 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SH3RF2Q8TEC5 729 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SLCO4A1Q96BD0 722 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 C3orf30Q96M34 536 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 HOPXQ9BPY8 73 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 COQ10BQ9H8M1 238 aa16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 FBRSL1Q9HCM7 1045 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-202ENST00000535997 SEPT4O43236 478 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 CDK14O94921 469 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 RTN3O95197 1032 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 TBX18O95935 607 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF37AP17032 561 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 OR1E1P30953 314 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 ETFBP38117 255 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 CDH13P55290 713 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 RALGDSQ12967 914 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 IKBKEQ14164 716 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 ADRM1Q16186 407 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 FAM26DQ5JW98 314 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 RAP1GAP2Q684P5 730 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 IYDQ6PHW0 289 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 DHFR2Q86XF0 187 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 LRTOMTQ8WZ04 291 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 RPRD1AQ96P16 312 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 OSBPL11Q9BXB4 747 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 TFB2MQ9H5Q4 396 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 MARCH2Q9P0N8 246 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 APPL1Q9UKG1 709 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 NDUFAF1Q9Y375 327 aa16.02■□□□□ 0.16
CHMP1A-202ENST00000535997 AZIN1O14977 448 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 B4GALT3O60512 393 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 ADAMTS4O75173 837 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 RPP40O75818 363 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms