RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 MKKSQ9NPJ1 570 aaPredicted RBP4.4□□□□□ -1.71
VBP1-203ENST00000535916 SNTG1Q9NSN8 517 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 AMDHD2Q9Y303 409 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 STON1Q9Y6Q2 735 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 DVL1O14640 695 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 CHKAP35790 457 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 GNL1P36915 607 aaPredicted RBP4.39□□□□□ -1.71
VBP1-203ENST00000535916 DVL1P1P54792 670 aaPredicted RBP4.39□□□□□ -1.71
VBP1-203ENST00000535916 GRIK3Q13003 919 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 ZNF876PQ49A33 203 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 TAOK1Q7L7X3 1001 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 GPAT4Q86UL3 456 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 FTSJ3Q8IY81 847 aaKnown RBP4.39□□□□□ -1.71
VBP1-203ENST00000535916 CNBD1Q8NA66 436 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 OR2AK2Q8NG84 335 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 STAMQ92783 540 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 ZNF524Q96C55 264 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 MOV10L1Q9BXT6 1211 aaKnown RBP4.39□□□□□ -1.71
VBP1-203ENST00000535916 KCNN2Q9H2S1 579 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 BABAM1Q9NWV8 329 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 HCFC1R1Q9NWW0 138 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
VBP1-203ENST00000535916 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
VBP1-203ENST00000535916 COL2A1P02458 1487 aaPredicted RBP4.38□□□□□ -1.71
VBP1-203ENST00000535916 BCAT2O15382 392 aaPredicted RBP4.38□□□□□ -1.71
VBP1-203ENST00000535916 ZNF500O60304 480 aaPredicted RBP4.38□□□□□ -1.71
VBP1-203ENST00000535916 MMP2P08253 660 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 CNPP09543 421 aaKnown RBP4.38□□□□□ -1.71
VBP1-203ENST00000535916 KRT5P13647 590 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 MYOD1P15172 320 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 AGAP20933 346 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 DDIT3P35638 169 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 HNRNPH2P55795 449 aaKnown RBP4.38□□□□□ -1.71
VBP1-203ENST00000535916 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
VBP1-203ENST00000535916 ADCK5Q3MIX3 580 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 SGO1Q5FBB7 561 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 TRNP1Q6NT89 227 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 SPICE1Q8N0Z3 855 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 KLHDC9Q8NEP7 349 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 OR10V1Q8NGI7 309 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 SPPL3Q8TCT6 385 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 LGALS12Q96DT0 336 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 EYA3Q99504 573 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 LRRC1Q9BTT6 524 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 NOD2Q9HC29 1040 aa4.38□□□□□ -1.71
VBP1-203ENST00000535916 EXTL3O43909 919 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 TUBBP07437 444 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 CORO1AP31146 461 aaKnown RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 ISL1P61371 349 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 TUBB4BP68371 445 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 TBL3Q12788 808 aaKnown RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 ANKRD1Q15327 319 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 PDSS1Q5T2R2 415 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 GPATCH4Q5T3I0 446 aaKnown RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 SLC35F3Q8IY50 421 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 RNF113BQ8IZP6 322 aaKnown RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 MYCT1Q8N699 235 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 LSM14AQ8ND56 463 aaKnown RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 ANKRD9Q96BM1 317 aaPredicted RBP4.37□□□□□ -1.71
VBP1-203ENST00000535916 COG8Q96MW5 612 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 KIAA1456Q9P272 454 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 TAGLN3Q9UI15 199 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 OR2W1Q9Y3N9 320 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 RIPOR2Q9Y4F9 1068 aa4.37□□□□□ -1.71
VBP1-203ENST00000535916 GOLGA6L9A6NEM1 432 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 PAX1P15863 534 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 VEPH1Q14D04 833 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 FBXO46Q6PJ61 603 aaPredicted RBP4.36□□□□□ -1.71
VBP1-203ENST00000535916 CEACAM20Q6UY09 585 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 HERC6Q8IVU3 1022 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 SUGP1Q8IWZ8 645 aaKnown RBP4.36□□□□□ -1.71
VBP1-203ENST00000535916 CCDC146Q8IYE0 955 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 ZNF248Q8NDW4 579 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 BEST2Q8NFU1 509 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 RUFY2Q8WXA3 655 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 C17orf77Q96MU5 243 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 BBS4Q96RK4 519 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 CMKLR1Q99788 373 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 TAOK3Q9H2K8 898 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 IL1RAPL1Q9NZN1 696 aa4.36□□□□□ -1.71
VBP1-203ENST00000535916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
VBP1-203ENST00000535916 MAOAP21397 527 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 TAF5Q15542 800 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 TAF11Q15544 211 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 CCDC96Q2M329 555 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 SLC45A4Q5BKX6 768 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 SIRPB2Q5JXA9 342 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 SLC35E4Q6ICL7 350 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 KCTD18Q6PI47 426 aaPredicted RBP4.35□□□□□ -1.71
VBP1-203ENST00000535916 ASB18Q6ZVZ8 466 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 LINGO2Q7L985 606 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 ADGRG6Q86SQ4 1221 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 TADA2BQ86TJ2 420 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 C2CD5Q86YS7 1000 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 USP38Q8NB14 1042 aa4.35□□□□□ -1.71
VBP1-203ENST00000535916 ADAD2Q8NCV1 583 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms