RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
CACNA1E-208ENST00000533229 PRICKLE1Q96MT3 831 aaPredicted RBP15.35■□□□□ 0.05
CACNA1E-208ENST00000533229 MGME1Q9BQP7 344 aa15.35■□□□□ 0.05
CACNA1E-208ENST00000533229 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
CACNA1E-208ENST00000533229 ZDHHC7Q9NXF8 308 aa15.35■□□□□ 0.05
CACNA1E-208ENST00000533229 CASQ2O14958 399 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 RNASEH1O60930 286 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SIX3O95343 332 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 KLKB1P03952 638 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 LYNP07948 512 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ZCCHC18P0CG32 403 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 MTHFD2P13995 350 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ZNF37AP17032 561 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ATP5C1P36542 298 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 MRPS22P82650 360 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 BTG3Q14201 252 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 FLOT2Q14254 428 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 OR4D1Q15615 310 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 GSTA3Q16772 222 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 DENND1CQ8IV53 801 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 OR4L1Q8NH43 312 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 CDKN2AIPNLQ96HQ2 116 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 C3orf30Q96M34 536 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 TTPALQ9BTX7 342 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SPON2Q9BUD6 331 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 YIPF3Q9GZM5 350 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 FBRSL1Q9HCM7 1045 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 TRPC7Q9HCX4 862 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 CCDC167Q9P0B6 97 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SCOCQ9UIL1 159 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 DNMT3LQ9UJW3 386 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 FBP2O00757 339 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 UBDO15205 165 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 TCN1P20061 433 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SCNN1BP51168 640 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 STC1P52823 247 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 INHBCP55103 352 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SH3BP2P78314 561 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 UGT3A2Q3SY77 523 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 SETMARQ53H47 684 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ACBD5Q5T8D3 534 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 RNF220Q5VTB9 566 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 MRNIPQ6NTE8 343 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 PCDH20Q8N6Y1 951 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 MDGA1Q8NFP4 955 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 PEX13Q92968 403 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 FAR2Q96K12 515 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ZNF599Q96NL3 588 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 NR1H4Q96RI1 486 aaPredicted RBP15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 TUBGCP5Q96RT8 1024 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 TTLL2Q9BWV7 592 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 GKN1Q9NS71 199 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 CATSPERZQ9NTU4 200 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 MED16Q9Y2X0 877 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 PCDHGA7Q9Y5G6 932 aa15.34■□□□□ 0.05
CACNA1E-208ENST00000533229 UBXN8O00124 270 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 ACOT8O14734 319 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 NDST3O95803 873 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 PRLP01236 227 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 SUOXP51687 545 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 KPNA1P52294 538 aaPredicted RBP15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 HERVK_113P63132 956 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 PTK2BQ14289 1009 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 RFTN1Q14699 578 aaPredicted RBP15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 ANKS3Q6ZW76 656 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 BHLHE22Q8NFJ8 381 aaPredicted RBP15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 OR9I1Q8NGQ6 314 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 RAET1EQ8TD07 263 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 PSKH2Q96QS6 385 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 ERVK-6Q9BXR3 956 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 MAGEH1Q9H213 219 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 VCXQ9H320 206 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 COMMD8Q9NX08 183 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 PSMD13Q9UNM6 376 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 PTGDR2Q9Y5Y4 395 aa15.33■□□□□ 0.04
CACNA1E-208ENST00000533229 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 EME2A4GXA9 379 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 TBKBP1A7MCY6 615 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 PSMD12O00232 456 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 COCHO43405 550 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 PENKP01210 267 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 ME2P23368 584 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 CDKN1CP49918 316 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 ZNF140P52738 457 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 FOXA1P55317 472 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 NFKB2Q00653 900 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 SMARCB1Q12824 385 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 PTPRRQ15256 657 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 LARP4Q71RC2 724 aaKnown RBP eCLIP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 PQLC1Q8N2U9 271 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 PTGR2Q8N8N7 351 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 WBP2Q969T9 261 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 ZNF512Q96ME7 567 aaPredicted RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 AARSD1Q9BTE6 412 aaKnown RBP15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 IKZF3Q9UKT9 509 aa15.32■□□□□ 0.04
CACNA1E-208ENST00000533229 LRFN2Q9ULH4 789 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms