RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ALDH9A1P49189 494 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 TIGD2Q4W5G0 525 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 CYP4Z1Q86W10 505 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 AADATQ8N5Z0 425 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 C19orf60Q96EN9 201 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 CORO1CQ9ULV4 474 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 A0A1B0GVM2 712 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 DHRS12A0PJE2 317 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 TCAF2A6NFQ2 919 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 BBIP1A8MTZ0 92 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 PEX1O43933 1283 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 COX7A2P14406 83 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 ACAP2Q15057 778 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 ARMC6Q6NXE6 501 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 HFE2Q6ZVN8 426 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 CLVS1Q8IUQ0 354 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 ADHFE1Q8IWW8 467 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 SETD9Q8NE22 299 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 OR6K2Q8NGY2 324 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 MAGEE2Q8TD90 523 aaPredicted RBP15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 GRIP2Q9C0E4 1043 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 ADPRHL2Q9NX46 363 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.04
PCDHA3-202ENST00000532566 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 A0A0J9YYE9 177 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PDZK1P1A8MUH7 402 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 HCRTO43612 131 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 CNTD1Q8N815 330 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 B4GALNT2Q8NHY0 566 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 MAGED4Q96JG8 741 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 OSBPL2Q9H1P3 480 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 CPSF6Q16630 551 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 DET1Q7L5Y6 550 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 AMIGO2Q86SJ2 522 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PQLC3Q8N755 202 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 MIEF2Q96C03 454 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC28A1O00337 649 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 QSOX1O00391 747 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 EDIL3O43854 480 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 FKTNO75072 461 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PPP2R1BP30154 601 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 HPCAL1P37235 193 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 NEK2P51955 445 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 TNK2Q07912 1038 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 EPS8Q12929 822 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 NEDD8Q15843 81 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 FNDC3BQ53EP0 1204 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PAGE2BQ5JRK9 111 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 FAM182AQ5T1J6 154 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 OSTM1Q86WC4 334 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 STX19Q8N4C7 294 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 TMCO5AQ8N6Q1 288 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 DNAJC1Q96KC8 554 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 TRMT13Q9NUP7 481 aaKnown RBP15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 TRPC4Q9UBN4 977 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 CNTN6Q9UQ52 1028 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 PCDHB1Q9Y5F3 818 aa15.32■□□□□ 0.04
PCDHA3-202ENST00000532566 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 IGKV6D-21A0A0A0MT36 114 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC22A3O75751 556 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CAPN15O75808 1086 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SNAI1O95863 264 aaPredicted RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ANXA6P08133 673 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ECHS1P30084 290 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 IDH3AP50213 366 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CDH4P55283 916 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 KHDC1Q4VXA5 237 aaKnown RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CERS6Q6ZMG9 384 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 UNC5BQ8IZJ1 945 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PGAM4Q8N0Y7 254 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 GLMNQ92990 594 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 NPY6RQ99463 290 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 GPR21Q99679 349 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 HOPXQ9BPY8 73 aaPredicted RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ZFYVE1Q9HBF4 777 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNHIT2Q9UHR6 403 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SNX8Q9Y5X2 465 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SPACA6W5XKT8 324 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 KAT6AQ92794 2004 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PRDX6P30041 224 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CHRNA4P43681 627 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PCYT1AP49585 367 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 LSM12Q3MHD2 195 aaKnown RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 TPD52L3Q96J77 140 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 BBS2Q9BXC9 721 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 RHOBTB2Q9BYZ6 727 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 HPS4Q9NQG7 708 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PLK2Q9NYY3 685 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 KIAA1522Q9P206 1035 aaPredicted RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC17A6Q9P2U8 582 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 EGFL7Q9UHF1 273 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 TBC1D30Q9Y2I9 924 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms