RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 KLF8O95600 359 aaPredicted RBP15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 CCNHP51946 323 aaPredicted RBP15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 TTC27Q6P3X3 843 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 UBE2R2Q712K3 238 aaPredicted RBP15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 NIPA2Q8N8Q9 360 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 MAGEB18Q96M61 343 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 BTBD1Q9H0C5 482 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 CD207Q9UJ71 328 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 IL10P22301 178 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 CACNG1Q06432 222 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 LRRC32Q14392 662 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 CYP20A1Q6UW02 462 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 OVCA2Q8WZ82 227 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 TEX12Q9BXU0 123 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 DPY30Q9C005 99 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 RABGEF1Q9UJ41 708 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 TNPO3Q9Y5L0 923 aaKnown RBP15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 IQCF5A8MTL0 148 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 PKMP14618 531 aaKnown RBP15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 ALFQ53S48 1182 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 SNX30Q5VWJ9 437 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 C11orf74Q86VG3 221 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 ZNF576Q9H609 170 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 UBR3Q6ZT12 1888 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 AKAP10O43572 662 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 PSMC3P17980 439 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 GKP32189 559 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 PIK3CGP48736 1102 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 NEK3P51956 506 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 XKR6Q5GH73 641 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 TMEM220Q6QAJ8 160 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 SERPINA9Q86WD7 417 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 WDR48Q8TAF3 677 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 OR2AG1Q9H205 316 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 RMND5AQ9H871 391 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 ARL5AQ9Y689 179 aa15.73■□□□□ 0.11
PPFIA1-222ENST00000532504 EDDM13A0A1B0GTR0 161 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 UBDO15205 165 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 GCATO75600 419 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 PEX6Q13608 980 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 PITRM1Q5JRX3 1037 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ZC3H3Q8IXZ2 948 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ZNF655Q8N720 491 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 AENQ8WTP8 325 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 HEXDCQ8WVB3 486 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ANKRD7Q92527 254 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 CATSPER2Q96P56 530 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 BBS4Q96RK4 519 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 M0QZQ0 153 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 FFAR2O15552 330 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 TPSB2P20231 275 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 SF1Q15637 639 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 TPSAB1Q15661 275 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 CYP51A1Q16850 503 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ZNF776Q68DI1 518 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 SCIMPQ6UWF3 145 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ENPP7Q6UWV6 458 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 PACS1Q6VY07 963 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 RERGQ96A58 199 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 MRPL46Q9H2W6 279 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 POLR3BQ9NW08 1133 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 WDR47O94967 919 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 RFTN1Q14699 578 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ASTE1Q2TB18 679 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 DDX1Q92499 740 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 RBBP8Q99708 897 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 PIF1Q9H611 641 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 IFNA16P05015 189 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ITPKAP23677 461 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 SKP1P63208 163 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 MPP1Q00013 466 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 AGKQ53H12 422 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 HLA-DQA1Q5Y7H0 255 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 DNAJC14Q6Y2X3 702 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 ADAMTSL2Q86TH1 951 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 EFCAB3Q8N7B9 438 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 OSBPL6Q9BZF3 934 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 DNAJC28Q9NX36 388 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 SIRPGQ9P1W8 387 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 POLG2Q9UHN1 485 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 TCAF1Q9Y4C2 921 aa15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 GOLGA4Q13439 2230 aaKnown RBP15.72■□□□□ 0.11
PPFIA1-222ENST00000532504 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 ALOX15BO15296 676 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 GOT2P00505 430 aaKnown RBP15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 NMBRP28336 390 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 KRT20P35900 424 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 IRAK1P51617 712 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 CPSF6Q16630 551 aaKnown RBP eCLIP15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 UAP1L1Q3KQV9 507 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 KRT78Q8N1N4 520 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 MRPL43Q8N983 215 aaKnown RBP15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 CMASQ8NFW8 434 aaPredicted RBP15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 SNX15Q9NRS6 342 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 RHPN2P1A8MT19 583 aa15.71■□□□□ 0.11
PPFIA1-222ENST00000532504 HIDE1A8MVS5 230 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms