RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PTGER3P43115 390 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 PSMD8P48556 350 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 DHPSP49366 369 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 TPMTP51580 245 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF135P52742 658 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 GPR85P60893 370 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 RNF4P78317 190 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MPP1Q00013 466 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 GSTM4Q03013 218 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SLC20A2Q08357 652 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SEMA3BQ13214 749 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 POU4F3Q15319 338 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SPA17Q15506 151 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 CST6Q15828 149 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 CA9Q16790 459 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 HADHQ16836 314 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 PARP15Q460N3 678 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 TTC31Q49AM3 519 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 BOLA3Q53S33 107 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 KCNT1Q5JUK3 1230 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 RNF220Q5VTB9 566 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 DAB2IPQ5VWQ8 1189 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 LYSMD4Q5XG99 296 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 PGBD2Q6P3X8 592 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 RFX8Q6ZV50 586 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARMCX6Q7L4S7 300 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 OVCH2Q7RTZ1 564 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 GPR155Q7Z3F1 870 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 DSG4Q86SJ6 1040 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SYT9Q86SS6 491 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 FAM124AQ86V42 546 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 HID1Q8IV36 788 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MMAAQ8IVH4 418 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 KIAA2013Q8IYS2 634 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 STK40Q8N2I9 435 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SH2D3CQ8N5H7 860 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 DEFB119Q8N690 84 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 RTL3Q8N8U3 475 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 OR8D1Q8WZ84 308 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 HSPH1Q92598 858 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARHGEF2Q92974 986 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARL8AQ96BM9 186 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 TOE1Q96GM8 510 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 CCDC114Q96M63 670 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 OMDQ99983 421 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 NUDT16L1Q9BRJ7 211 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ACE2Q9BYF1 805 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MAGEH1Q9H213 219 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 PABPC3Q9H361 631 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 CD93Q9NPY3 652 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SEMA4GQ9NTN9 838 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 LCMT1Q9UIC8 334 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SCML1Q9UN30 329 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 NCKAP1Q9Y2A7 1128 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MYOFQ9NZM1 2061 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 CXorf51AA0A1B0GTR3 108 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZSCAN5CA6NGD5 496 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 TMEM110-MUSTN1A8MSY1 372 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 MEI4A8MW99 385 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 C1QTNF3-AMACRE9PGA6 284 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 MCF2LO15068 1137 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 MID1O15344 667 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 SMAD6O43541 496 aaKnown RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 BUB1O43683 1085 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 KDELR3O43731 214 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 FOXD2O60548 495 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZMPSTE24O75844 475 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 PROSCO94903 275 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 IPO7O95373 1038 aaKnown RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 IL1BP01584 269 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 TCF4P15884 667 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 GOT1P17174 413 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 C5AR1P21730 350 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 IL1R2P27930 398 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 PEX2P28328 305 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 SLC8A1P32418 973 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 CYLC1P35663 651 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARL4AP40617 200 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 DPP6P42658 865 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 MAGEA1P43355 309 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 HCAR3P49019 387 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 SERPINH1P50454 418 aaKnown RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 DNA2P51530 1060 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 NDST2P52849 883 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 YBEYP58557 167 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 PHC1P78364 1004 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARF5P84085 180 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 CTBSQ01459 385 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 SLC25A11Q02978 314 aaKnown RBP5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF33AQ06730 810 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 KRT81Q14533 505 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 MESDQ14696 234 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 CCDC6Q16204 474 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 CSRP2Q16527 193 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 DPYSL2Q16555 572 aa5.86□□□□□ -1.47
HMGB1P42-201ENST00000532126 SMTNL2Q2TAL5 461 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms