RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 FAM124AQ86V42 546 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SIAH3Q8IW03 269 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SFTPA1Q8IWL2 248 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM132CQ8N3T6 1108 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 HJURPQ8NCD3 748 aaPredicted RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 LPCAT1Q8NF37 534 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GDPD5Q8WTR4 605 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ATL1Q8WXF7 558 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM125Q96AQ2 219 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MIB2Q96AX9 1013 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 HARBI1Q96MB7 349 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 INTS14Q96SY0 518 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TXN2Q99757 166 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TEX13BQ9BXU2 312 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TRIM7Q9C029 511 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MAGEE1Q9HCI5 957 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GALNT9Q9HCQ5 603 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 PRMT8Q9NR22 394 aaPredicted RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 IARS2Q9NSE4 1012 aaKnown RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 DNAJB4Q9UDY4 337 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ITGA11Q9UKX5 1188 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 AATKQ6ZMQ8 1374 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MYOCOSA0A1B0GUC4 107 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 EBAG9O00559 213 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ANGPT2O15123 496 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 VEGFDO43915 354 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SMPD2O60906 423 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 JRKO75564 520 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 VNN1O95497 513 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 IL1AP01583 271 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 KLKB1P03952 638 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 HMOX1P09601 288 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM58BPP0C7Q3 252 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 VPREB1P12018 145 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 PFKFB1P16118 471 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 NDUFS1P28331 727 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 EPHB2P29323 1055 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ADRA1BP35368 520 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 VAV2P52735 878 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ARSFP54793 590 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 TAS2R40P59535 323 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CXADRP78310 365 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CFHR3Q02985 330 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 RBPJQ06330 500 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CNGA3Q16281 694 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CYP1B1Q16678 543 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 HFEQ30201 348 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 TBC1D25Q3MII6 688 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SPDYE7PQ495Y7 208 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 PLK5Q496M5 336 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FBXO43Q4G163 708 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 KRT39Q6A163 491 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 RBM43Q6ZSC3 357 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 MOB3CQ70IA8 216 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 DZIP1Q86YF9 867 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 KBTBD2Q8IY47 623 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ELOA2Q8IYF1 753 aaPredicted RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SCYL3Q8IZE3 742 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 D2HGDHQ8N465 521 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 OTUD6BQ8N6M0 293 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 KDM1BQ8NB78 822 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 KIAA1524Q8TCG1 905 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM216AQ8WUB2 273 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 BCL2L2Q92843 193 aaPredicted RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 EXT2Q93063 718 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FUBP1Q96AE4 644 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ALG14Q96F25 216 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 EDC3Q96F86 508 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM84AQ96KN4 292 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SLITRK1Q96PX8 696 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 NUDCD1Q96RS6 583 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 PRR25Q96S07 402 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CDRT15Q96T59 188 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 IFT27Q9BW83 186 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 TRIM2Q9C040 744 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 NUAK2Q9H093 628 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 TXNRD2Q9NNW7 524 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 PAPOLBQ9NRJ5 636 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SEPT10Q9P0V9 454 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ZNF624Q9P2J8 865 aaPredicted RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 FBXW11Q9UKB1 542 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 CPSF3Q9UKF6 684 aaKnown RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 SIRT4Q9Y6E7 314 aaPredicted RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
AC055878.1-201ENST00000531858 TRBV2A0A0J9YWF9 115 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 GAGE12BA1L429 117 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 GAGE12HA6NDE8 117 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 CCDC169A6NNP5 214 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 CES2O00748 559 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 RASGRF2O14827 1237 aa4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 SMAD9O15198 467 aaKnown RBP4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 SPRY1O43609 319 aaPredicted RBP4.37□□□□□ -1.71
AC055878.1-201ENST00000531858 CDC14BO60729 498 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms