RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FLNCQ14315 2725 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 EIF3CLB5ME19 914 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 B4GAT1O43505 415 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 FUCA1P04066 466 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 MYCLP1P12525 358 aaPredicted RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 WT1P19544 449 aaPredicted RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 OR1D5P58170 312 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 AP1S1P61966 158 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 NFKB2Q00653 900 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 RFTN1Q14699 578 aaPredicted RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 LBRQ14739 615 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 PTPRRQ15256 657 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 CNGA3Q16281 694 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 MANEAQ5SRI9 462 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 HEATR4Q86WZ0 1026 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 NRROSQ86YC3 692 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 PDCD6IPQ8WUM4 868 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 PSKH2Q96QS6 385 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 EIF3CQ99613 913 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 CMKLR1Q99788 373 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 TRIM4Q9C037 500 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 CLMPQ9H6B4 373 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 CWC15Q9P013 229 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 SEPT3Q9UH03 358 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 PCDHGA4Q9Y5G9 962 aa18.44■□□□□ 0.54
SSSCA1-206ENST00000531405 PTPN13Q12923 2485 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 TMEM191CA6NGB0 347 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 LRRC10BA6NIK2 292 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 PRPSAP2O60256 369 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 RNF8O76064 485 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 CEACAM5P06731 702 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 CCDC172P0C7W6 258 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 CCNB1P14635 433 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 AK4P27144 223 aaPredicted RBP18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 ALDH4A1P30038 563 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 CYP4F2P78329 520 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 DPYSQ14117 519 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 NCAPHQ15003 741 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 TMCO4Q5TGY1 634 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 PGBD5Q8N414 524 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 RCBTB1Q8NDN9 531 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 KIAA1524Q8TCG1 905 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 GPBAR1Q8TDU6 330 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 ZDHHC1Q8WTX9 485 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 PATE1Q8WXA2 126 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 TMEM159Q96B96 161 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 NUDT22Q9BRQ3 303 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 ARHGAP9Q9BRR9 750 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 SEPT10Q9P0V9 454 aa18.43■□□□□ 0.54
SSSCA1-206ENST00000531405 GOLGA6CA6NDK9 693 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 GOLGA6BA6NDN3 693 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 CYSRT1A8MQ03 144 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 LRCH4O75427 683 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 CPNE6O95741 557 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 CPP00450 1065 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 FGF1P05230 155 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 FAM87AP0C7U9 286 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 GOLGA6DP0CG33 693 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 CCL4P13236 92 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 LHCGRP22888 699 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 VIPR1P32241 457 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 ETV3P41162 512 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 GNPDA1P46926 289 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 RENBPP51606 427 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 KCNC4Q03721 635 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 ZNF235Q14590 738 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 STX1AQ16623 288 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 TSR1Q2NL82 804 aaKnown RBP18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 ZNF574Q6ZN55 896 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 HSD11B1LQ7Z5J1 315 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 PIM3Q86V86 326 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 JPH3Q8WXH2 748 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 TEX101Q9BY14 249 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 FAM117AQ9C073 453 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 PHPT1Q9NRX4 125 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 ETNK2Q9NVF9 386 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 GOLGA6AQ9NYA3 693 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 TAAR2Q9P1P5 351 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 SUFUQ9UMX1 484 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 HEMK1Q9Y5R4 338 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 ST14Q9Y5Y6 855 aa18.42■□□□□ 0.54
SSSCA1-206ENST00000531405 A0A0U1RQS6 177 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 LRRC53A6NM62 1247 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 RHPN2P1A8MT19 583 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 PDE2AO00408 941 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 HTRA2O43464 458 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 HEXIM1O94992 359 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 WISP1O95388 367 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 ECEL1O95672 775 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 PEX11BO96011 259 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 POLD2P49005 469 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 MAXP61244 160 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 ILF3Q12906 894 aaKnown RBP eCLIP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 TRAF2Q12933 501 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 SLC30A9Q6PML9 568 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 ZNF438Q7Z4V0 828 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms