RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 MPP1Q00013 466 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 MERTKQ12866 999 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 CTXN3Q4LDR2 81 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 LCLAT1Q6UWP7 414 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 ATG14Q6ZNE5 492 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 C16orf59Q7L2K0 433 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 DACT3Q96B18 629 aaPredicted RBP17.93■□□□□ 0.46
LTBP3-210ENST00000528516 C17orf80Q9BSJ5 609 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 HAPLN2Q9GZV7 340 aa17.93■□□□□ 0.46
LTBP3-210ENST00000528516 ADAMTSL1Q8N6G6 1762 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 SMIM10L2AP0DMW4 78 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 SMIM10L2BP0DMW5 78 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 PRKAA1Q13131 559 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 DEPDC1Q5TB30 811 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TSPAN17Q96FV3 270 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 PEBP4Q96S96 227 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 ACOX2Q99424 681 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 CEP44Q9C0F1 390 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 POU2F3Q9UKI9 436 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 SNX5Q9Y5X3 404 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 MAST2Q6P0Q8 1798 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 PRRG1O14668 218 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 FASP25445 335 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 NR2C2P49116 596 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 OLFM1Q99784 485 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 ANKRD60Q9BZ19 345 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 CNTNAP1P78357 1384 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 NRP1O14786 923 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 PLA2G6O60733 806 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 LSM3P62310 102 aaKnown RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 RAP1GAP2Q684P5 730 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 C4orf22Q6V702 233 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 NIPA2Q8N8Q9 360 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 LPCAT1Q8NF37 534 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 CPNE1Q99829 537 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TRIM15Q9C019 465 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 COPG1Q9Y678 874 aaKnown RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 COL11A2P13942 1736 aaPredicted RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 LINC00854A0A1B0GVQ3 168 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 YJEFN3A6XGL0 299 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TMEM233B4DJY2 109 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 DEAF1O75398 565 aaPredicted RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 ATP6V1B2P21281 511 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 PSMA4P25789 261 aaKnown RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 GRTP1Q5TC63 336 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TMC5Q6UXY8 1006 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 ZNF567Q8N184 647 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 CALML6Q8TD86 181 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 TRUB1Q8WWH5 349 aaKnown RBP17.92■□□□□ 0.46
LTBP3-210ENST00000528516 SPAG4Q9NPE6 437 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 CYTH4Q9UIA0 394 aa17.92■□□□□ 0.46
LTBP3-210ENST00000528516 ARFGEF1Q9Y6D6 1849 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ARID1BQ8NFD5 2236 aaPredicted RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CLDN25C9JDP6 229 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 SLC7A1P30825 629 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ADRA1BP35368 520 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CTBSQ01459 385 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 MBTD1Q05BQ5 628 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 SLC44A2Q8IWA5 706 aaPredicted RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CMASQ8NFW8 434 aaPredicted RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 NXNL1Q96CM4 212 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ZNF670Q9BS34 389 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 POLE4Q9NR33 117 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CNOT11Q9UKZ1 510 aaKnown RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 A6NL46 340 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 TRPC5OSA6NMA1 111 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 PTGES3LE9PB15 166 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 M0R3G1 203 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CLPXO76031 633 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ALBP02768 609 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 LRPAP1P30533 357 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CPT1AP50416 773 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 FAM171A1Q5VUB5 890 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 TIFABQ6ZNK6 161 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 HFE2Q6ZVN8 426 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 WDTC1Q8N5D0 677 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 OR6K2Q8NGY2 324 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 MTFMTQ96DP5 389 aaKnown RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 SIX4Q9UIU6 781 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ZNF195O14628 629 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 SNAP91O60641 907 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 GLDCP23378 1020 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 PWP1Q13610 501 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 GRM3Q14832 879 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 POLD3Q15054 466 aaPredicted RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 SF3B4Q15427 424 aaKnown RBP eCLIP17.91■□□□□ 0.462e-8■■■■■ 31.1
LTBP3-210ENST00000528516 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 C9orf57Q5W0N0 161 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CLEC6AQ6EIG7 209 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 MRNIPQ6NTE8 343 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ADCK1Q86TW2 530 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 TP53INP2Q8IXH6 220 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 ZNF420Q8TAQ5 688 aaPredicted RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 HTRA1Q92743 480 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 HDAC10Q969S8 669 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 DDX28Q9NUL7 540 aaKnown RBP17.91■□□□□ 0.46
LTBP3-210ENST00000528516 FBXO5Q9UKT4 447 aa17.91■□□□□ 0.46
LTBP3-210ENST00000528516 CXCL11O14625 94 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 DLGAP3O95886 979 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms