RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PDE2AO00408 941 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 PPP1R12AO14974 1030 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 TRBC1P01850 177 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 ZNF30P17039 623 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 CDKN2BP42772 138 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 NIPAL4Q0D2K0 466 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 C1orf61Q13536 156 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 GAS2L3Q86XJ1 694 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 DCBLD1Q8N8Z6 715 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 OR56A4Q8NGH8 313 aa33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 CALR3Q96L12 384 aaKnown RBP33.06■■■□□ 2.88
SSSCA1-205ENST00000527920 KCNK1O00180 336 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 NDUFA10O95299 355 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 JCHAINP01591 159 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 RPIAP49247 311 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 TFDP2Q14188 446 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 NR0B2Q15466 257 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 MFSD7Q6UXD7 560 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 HSD11B1LQ7Z5J1 315 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 RFX6Q8HWS3 928 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 RAVER1Q8IY67 606 aaKnown RBP33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 LRRN4Q8WUT4 740 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 SCG3Q8WXD2 468 aaKnown RBP33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 RBM15Q96T37 977 aaKnown RBP eCLIP33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 CLCA2Q9UQC9 943 aa33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 EPN1Q9Y6I3 576 aaPredicted RBP33.05■■■□□ 2.88
SSSCA1-205ENST00000527920 APC2O95996 2303 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 EME2A4GXA9 379 aaPredicted RBP33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 SRRM3A6NNA2 597 aaPredicted RBP33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 YY2O15391 372 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 OPA1O60313 960 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 PRLP01236 227 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 CTSEP14091 401 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 ETV3P41162 512 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 NR2C2P49116 596 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 EPHB1P54762 984 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 CLDN6P56747 220 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 DPTQ07507 201 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 TARDBPQ13148 414 aaKnown RBP eCLIP33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 BZW1Q7L1Q6 419 aaKnown RBP33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 TSPAN33Q86UF1 283 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 KATNAL2Q8IYT4 538 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 PELI3Q8N2H9 469 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 CNTD1Q8N815 330 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 PDXPQ96GD0 296 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 TEX101Q9BY14 249 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 FGF22Q9HCT0 170 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 DMXL2Q8TDJ6 3036 aa33.04■■■□□ 2.88
SSSCA1-205ENST00000527920 ANKRD11Q6UB99 2663 aaPredicted RBP33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 TMEM202A6NGA9 273 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 CAPN8A6NHC0 703 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 IPO7O95373 1038 aaKnown RBP33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 TNFP01375 233 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 MYCLP1P12525 358 aaPredicted RBP33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 TNNT1P13805 278 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 CTPS1P17812 591 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 ZBTB17Q13105 803 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 CDCP2Q5VXM1 449 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 Q6ZVL8 140 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 TECPR1Q7Z6L1 1165 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 IFI44Q8TCB0 444 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 OR1E3Q8WZA6 343 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 NAT6Q93015 286 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 LYSMD1Q96S90 227 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 PCDH9Q9HC56 1237 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 PHPT1Q9NRX4 125 aaPredicted RBP33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 CHKBQ9Y259 395 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 ACACAQ13085 2346 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 ZZEF1O43149 2961 aa33.03■■■□□ 2.88
SSSCA1-205ENST00000527920 SOWAHDA6NJG2 315 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 TAF4O00268 1085 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 KRT37O76014 449 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 MYF5P13349 255 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 AP1B1Q10567 949 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 LRRC66Q68CR7 880 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 CRTC1Q6UUV9 634 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 ZNF765Q7L2R6 523 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 NLRP8Q86W28 1048 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 GKN2Q86XP6 184 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 SLC35F3Q8IY50 421 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 MDM1Q8TC05 714 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 NXPE2Q96DL1 559 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 LGR4Q9BXB1 951 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 NRSN2Q9GZP1 204 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 DOLKQ9UPQ8 538 aa33.02■■■□□ 2.88
SSSCA1-205ENST00000527920 PKD1L2Q7Z442 2459 aa33.01■■■□□ 2.88
SSSCA1-205ENST00000527920 MT-CO3P00414 261 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 CELA2BP08218 269 aaPredicted RBP33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 MMP2P08253 660 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 PTPRRQ15256 657 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 CDKN3Q16667 212 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 DENND2CQ68D51 928 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 NPNTQ6UXI9 565 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 SPOCD1Q6ZMY3 1216 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 RD3Q7Z3Z2 195 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 GOLPH3Q9H4A6 298 aa33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP33.01■■■□□ 2.87
SSSCA1-205ENST00000527920 LRP4O75096 1905 aa33■■■□□ 2.87
SSSCA1-205ENST00000527920 ZRANB2O95218 330 aaKnown RBP eCLIP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms