RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CORO1AP31146 461 aaKnown RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 EIF2S3P41091 472 aaKnown RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 MMP14P50281 582 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 EEF1A1P68104 462 aaKnown RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 TMEM187Q14656 261 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 PUM3Q15397 648 aaKnown RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 TCTE1Q5JU00 501 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 EEF1A1P5Q5VTE0 462 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 ASB18Q6ZVZ8 466 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 P2RY8Q86VZ1 359 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 KIAA2013Q8IYS2 634 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 CPXM2Q8N436 756 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 TRIM58Q8NG06 486 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 FAM222BQ8WU58 562 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 ZNF689Q96CS4 500 aaPredicted RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 MTERF1Q99551 399 aaKnown RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 CMKLR1Q99788 373 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 G6PC2Q9NQR9 355 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 DACT1Q9NYF0 836 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 ZNF624Q9P2J8 865 aaPredicted RBP2.57□□□□□ -2
ECHDC1-219ENST00000526299 C2CD2Q9Y426 696 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 NDUFAF8A1L188 74 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 MEIOCA2RUB1 952 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 CBY3A6NI87 242 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 PSMD14O00487 310 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 SH2B2O14492 632 aaPredicted RBP2.56□□□□□ -2
ECHDC1-219ENST00000526299 KLK8O60259 260 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 CIDEAO60543 219 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 CD48P09326 243 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 PRSS56P0CW18 603 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 EFNA5P52803 228 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 PRKAA2P54646 552 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 YWHAZP63104 245 aaKnown RBP2.56□□□□□ -2
ECHDC1-219ENST00000526299 CHRNDQ07001 517 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 WDR38Q5JTN6 314 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 FAM53AQ6NSI3 398 aaPredicted RBP2.56□□□□□ -2
ECHDC1-219ENST00000526299 ANKRD54Q6NXT1 300 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 NOXA1Q86UR1 476 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 APLFQ8IW19 511 aaPredicted RBP2.56□□□□□ -2
ECHDC1-219ENST00000526299 ZNF440Q8IYI8 595 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 CEP70Q8NHQ1 597 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 ZNF473Q8WTR7 871 aaKnown RBP2.56□□□□□ -2
ECHDC1-219ENST00000526299 PPM1EQ8WY54 764 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 MXRA8Q9BRK3 442 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 ZDHHC18Q9NUE0 388 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 KLHL42Q9P2K6 505 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 LRCH1Q9Y2L9 728 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
ECHDC1-219ENST00000526299 IGLV5-45A0A087WSX0 123 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 C17orf113A0A1B0GUU1 675 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 GOLGA6L9A6NEM1 432 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 ACKR2O00590 384 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 ARHGEF9O43307 516 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 ANP32CO43423 234 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 ETFAP13804 333 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 GNB3P16520 340 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 AARSP49588 968 aaKnown RBP eCLIP2.55□□□□□ -2
ECHDC1-219ENST00000526299 CLDN2P57739 230 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 CUL4BQ13620 913 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 TIGD6Q17RP2 521 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 EIF2S3LQ2VIR3 472 aaKnown RBP2.55□□□□□ -2
ECHDC1-219ENST00000526299 ZFP69Q49AA0 526 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 LRRC8EQ6NSJ5 796 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 DENND1BQ6P3S1 775 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 FAM171BQ6P995 826 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 MTSS1LQ765P7 747 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 CNOT9Q92600 299 aaKnown RBP2.55□□□□□ -2
ECHDC1-219ENST00000526299 RUBCNQ92622 972 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 TWNKQ96RR1 684 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 SIN3AQ96ST3 1273 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 PCYT2Q99447 389 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 OPRPNQ99935 248 aaPredicted RBP2.55□□□□□ -2
ECHDC1-219ENST00000526299 VGLL1Q99990 258 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 NUF2Q9BZD4 464 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 KCNN2Q9H2S1 579 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 TFB2MQ9H5Q4 396 aaKnown RBP2.55□□□□□ -2
ECHDC1-219ENST00000526299 INTS10Q9NVR2 710 aaKnown RBP2.55□□□□□ -2
ECHDC1-219ENST00000526299 CHPF2Q9P2E5 772 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 CTNNAL1Q9UBT7 734 aa2.55□□□□□ -2
ECHDC1-219ENST00000526299 A0A0G2JLW4 131 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 PABPN1LA6NDY0 278 aaKnown RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 SH2D7A6NKC9 451 aaPredicted RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 E9PQ18 207 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 STX16-NPEPL1H3BU86 382 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 H7C423 109 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 STX16O14662 325 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 IGHV4-39P01824 125 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 CYC1P08574 325 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 ERVK-10P10266 1014 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 DPEP1P16444 411 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 RRM1P23921 792 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 BDKRB2P30411 391 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 MCM2P49736 904 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 BLKP51451 505 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 HNRNPH2P55795 449 aaKnown RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 GAGE5Q13069 117 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 GAGE6Q13070 117 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 KRT24Q2M2I5 525 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 ZNF790Q6PG37 636 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 TRPT1Q86TN4 253 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms