RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 UXS1Q8NBZ7 420 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CCNYQ8ND76 341 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 FAM46DQ8NEK8 389 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 HUS1BQ8NHY5 278 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 MBD3L2Q8NHZ7 208 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 BPIFB1Q8TDL5 484 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ELP5Q8TE02 316 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CACTINQ8WUQ7 758 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 SLC9A6Q92581 669 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EXT2Q93063 718 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 FBXO32Q969P5 355 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 NCLNQ969V3 563 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 MMABQ96EY8 250 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 DYDC2Q96IM9 177 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 NSMCE2Q96MF7 247 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZNF560Q96MR9 790 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 TTC25Q96NG3 672 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZNF558Q96NG5 402 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 NECTIN4Q96NY8 510 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PSKH2Q96QS6 385 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 SECISBP2Q96T21 854 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 NAP1L3Q99457 506 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 RAB17Q9H0T7 212 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EPC1Q9H2F5 836 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PLK3Q9H4B4 646 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EPHX3Q9H6B9 360 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 AKIRIN1Q9H9L7 192 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 USP29Q9HBJ7 922 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZFP64Q9NPA5 681 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 TLR9Q9NR96 1032 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PRMT7Q9NVM4 692 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 IL1RAPL1Q9NZN1 696 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 NCKIPSDQ9NZQ3 722 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ADAMTS6Q9UKP5 1117 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PLAGL1Q9UM63 463 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EXOC6BQ9Y2D4 811 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 STK38LQ9Y2H1 464 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PCDHB7Q9Y5E2 793 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 SHROOM2Q13796 1616 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 MAPKBP1O60336 1514 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 UBE4BO95155 1302 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SPATA31A3Q5VYP0 1347 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 A0A0A6YYC8 382 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 OR6C74A6NCV1 312 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TCAF2A6NFQ2 919 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ARHGAP42A6NI28 874 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 LRRC53A6NM62 1247 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ZNF716A6NP11 495 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 E9PI62 339 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 F8W735 103 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 I3L1I5 382 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 M0QYT0 321 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PLK4O00444 970 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 DNALI1O14645 258 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 NVLO15381 856 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 MED7O43513 233 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SSX5O60225 188 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 CBFA2T3O75081 653 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MED24O75448 989 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SCGB2A1O75556 95 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 CIB2O75838 187 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 GASTP01350 101 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SERPING1P05155 500 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ENO1P06733 434 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 RHOP08100 348 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SRPRAP08240 638 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 VIMP08670 466 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 ZNF735P0CB33 412 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ZNF853P0CG23 659 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 STAG3L3P0CL85 134 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 KRT3P12035 628 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PNLIPP16233 465 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 FUT1P19526 365 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 RAB6AP20340 208 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 FDXRP22570 491 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 CASRP41180 1078 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PCP4P48539 62 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 NDUFV1P49821 464 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ZNF135P52742 658 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 CORO7P57737 925 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ACTR3P61158 418 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ABATP80404 500 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TCF15Q12870 199 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SPP2Q13103 211 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 KLF10Q13118 480 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 RUNX2Q13950 521 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PCOLCEQ15113 449 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ZXDCQ2QGD7 858 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 EPC2Q52LR7 807 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TAF1BQ53T94 588 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PRAMEF20Q5VT98 475 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 FAM160B1Q5W0V3 765 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PMS2CLQ68D20 193 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TMCO2Q7Z6W1 182 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 TADA2BQ86TJ2 420 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 COMTD1Q86VU5 262 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SERPINA12Q8IW75 414 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MFN1Q8IWA4 741 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms