RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 TOMM20Q15388 145 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 OR9Q1Q8NGQ5 310 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 HDAC10Q969S8 669 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 SLC25A51Q9H1U9 297 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 ATAD3AQ9NVI7 634 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 MYBL2P10244 700 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 NOMO1Q15155 1222 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 RHBDF2Q6PJF5 856 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 ADAMTSL2Q86TH1 951 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 C12orf76Q8N812 135 aaPredicted RBP17.07■□□□□ 0.32
BEST1-203ENST00000524877 NUS1Q96E22 293 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 KLHL28Q9NXS3 571 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 RIPK2O43353 540 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 CTSAP10619 480 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 TYRP14679 529 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 SSTR1P30872 391 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
BEST1-203ENST00000524877 MTTPP55157 894 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 DSC2Q02487 901 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 NDUFA5Q16718 116 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 MYH1P12882 1939 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 ITGAXP20702 1163 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 ATP6V1C1P21283 382 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 CRADDP78560 199 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 NETO2Q8NC67 525 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 CCDC90BQ9GZT6 254 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 CA14Q9ULX7 337 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 SNX10Q9Y5X0 201 aa17.07■□□□□ 0.32
BEST1-203ENST00000524877 TSHRP16473 764 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 CDK7P50613 346 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
BEST1-203ENST00000524877 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 PNPLA8Q9NP80 782 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ILVBLA1L0T0 632 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 PGM1P36871 562 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 GHRHRQ02643 423 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 LAYNQ6UX15 382 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 MMAAQ8IVH4 418 aaKnown RBP17.06■□□□□ 0.32
BEST1-203ENST00000524877 ALG9Q9H6U8 611 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 VTI1BQ9UEU0 232 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 EFR3BQ9Y2G0 817 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 USP15Q9Y4E8 981 aaPredicted RBP17.06■□□□□ 0.32
BEST1-203ENST00000524877 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 EFCAB3Q8N7B9 438 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ACSM2AQ08AH3 577 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ACSM2BQ68CK6 577 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 CENPLQ8N0S6 344 aaPredicted RBP17.06■□□□□ 0.32
BEST1-203ENST00000524877 SUN5Q8TC36 379 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 STYXQ8WUJ0 223 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 PTCD2Q8WV60 388 aaKnown RBP17.06■□□□□ 0.32
BEST1-203ENST00000524877 SMARCD2Q92925 531 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ZNF599Q96NL3 588 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 KLHL3Q9UH77 587 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 MAPRE3Q9UPY8 281 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 OR10H2O60403 315 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 TNFP01375 233 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 FUT11Q495W5 492 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 LDLRAP1Q5SW96 308 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 CDH19Q9H159 772 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 RABGEF1Q9UJ41 708 aa17.06■□□□□ 0.32
BEST1-203ENST00000524877 ALADP13716 330 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 ATP6V0D1P61421 351 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 LUZP2Q86TE4 346 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 BRSK1Q8TDC3 778 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 CLEC4CQ8WTT0 213 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 PSMG2Q969U7 264 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 MTFMTQ96DP5 389 aaKnown RBP17.05■□□□□ 0.32
BEST1-203ENST00000524877 APOPT1Q96IL0 206 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 GPR62Q9BZJ7 368 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 LRRC19Q9H756 370 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 CYP7B1O75881 506 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 MSLNQ13421 630 aaPredicted RBP17.05■□□□□ 0.32
BEST1-203ENST00000524877 OR4K2Q8NGD2 314 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 NTAN1Q96AB6 310 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 CCT7Q99832 543 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 GINS4Q9BRT9 223 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 KLQ9UEF7 1012 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 ASNA1O43681 348 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 LRCH4O75427 683 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 CXCR3P49682 368 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 UAP1L1Q3KQV9 507 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 PLEKHG4Q58EX7 1191 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 XKR6Q5GH73 641 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 SWT1Q5T5J6 900 aaKnown RBP17.05■□□□□ 0.32
BEST1-203ENST00000524877 ATXN7L2Q5T6C5 722 aaPredicted RBP17.05■□□□□ 0.32
BEST1-203ENST00000524877 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 UNC5AQ6ZN44 842 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 SYT12Q8IV01 421 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 DTX3LQ8TDB6 740 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 MAGEB18Q96M61 343 aa17.05■□□□□ 0.32
BEST1-203ENST00000524877 MRPS33Q9Y291 106 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms