RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 YEATS4O95619 227 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MYL3P08590 195 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 SUPT20HL2P0C7V6 817 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 GOLGA6DP0CG33 693 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MMP8P22894 467 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MARK3P27448 753 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CASP1P29466 404 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 HOXC8P31273 242 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ATICP31939 592 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PRPHP41219 470 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 POLD2P49005 469 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 VPS41P49754 854 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ACLYP53396 1101 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 NUCB2P80303 420 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ZXDBP98169 803 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PRKCEQ02156 737 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ORC2Q13416 577 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 DRP2Q13474 957 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CTTNQ14247 550 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 NEDD9Q14511 834 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 KARSQ15046 597 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PLCB4Q15147 1175 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 LRRC26Q2I0M4 334 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PLEKHG6Q3KR16 790 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MARCH8Q5T0T0 291 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 FAM90A2PQ658T7 463 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PLA2G4FQ68DD2 849 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ABLIM2Q6H8Q1 611 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 TLDC1Q6P9B6 456 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CXCL17Q6UXB2 119 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CLEC17AQ6ZS10 378 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 ANO5Q75V66 913 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 TRMT1LQ7Z2T5 733 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MIER3Q7Z3K6 550 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CATSPER3Q86XQ3 398 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 RBMXL3Q8N7X1 1067 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 AFAP1L1Q8TED9 768 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 TRAPPC12Q8WVT3 735 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 SEPT1Q8WYJ6 367 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 OVCA2Q8WZ82 227 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MSI2Q96DH6 328 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 IQCDQ96DY2 449 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 CDHR1Q96JP9 859 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 FAM20AQ96MK3 541 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PLIN2Q99541 437 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MPHOSPH6Q99547 160 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 RIT2Q99578 217 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 HSD17B14Q9BPX1 270 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 EIF2AK1Q9BQI3 630 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 LXNQ9BS40 222 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 POLD4Q9HCU8 107 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 FZD3Q9NPG1 666 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 TBC1D22BQ9NU19 505 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 BLOC1S4Q9NUP1 217 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 GOLGA6AQ9NYA3 693 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 VPS4AQ9UN37 437 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PROCRQ9UNN8 238 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 Q9Y3F1 56 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PCDHB2Q9Y5E7 798 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PCDHA10Q9Y5I2 948 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 SRPRBQ9Y5M8 271 aaKnown RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 MORC2Q9Y6X9 1032 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-208ENST00000524652 TRIOO75962 3097 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 PLXNA4Q9HCM2 1894 aa3.2□□□□□ -1.9
CSDE1-208ENST00000524652 UMODL1Q5DID0 1318 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 USP34Q70CQ2 3546 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 A0A087WZ62 844 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 KIR2DS5A0A0G2JLQ3 304 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 FAM237AA0A1B0GTK4 181 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 A0A1B0GVL5 298 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 VSTM5A8MXK1 200 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 B4DLN1 442 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 KIR2DS3K7RE56 304 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 LAD1O00515 517 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SLC28A2O43868 658 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 IL18RAPO95256 599 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 CD4P01730 458 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 TFRCP02786 760 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 S100BP04271 92 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 EDN1P05305 212 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ENO1P06733 434 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 NGFRP08138 427 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 HOXB2P14652 356 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 RHCEP18577 417 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 DRD1P21728 446 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ITGB8P26012 769 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 MST1P26927 711 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 RPA1P27694 616 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SLC8A1P32418 973 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 LONP1P36776 959 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 CDK7P50613 346 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF84P51523 738 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SLC12A3P55017 1021 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 RHDQ02161 417 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 DMWDQ09019 674 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 GAB1Q13480 694 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ITGA7Q13683 1181 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 DAG1Q14118 895 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 PDIA5Q14554 519 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 GRM3Q14832 879 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms