RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MGME1Q9BQP7 344 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 SIKE1Q9BRV8 207 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 FAM167BQ9BTA0 163 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 FSD1LQ9BXM9 530 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 IQCGQ9H095 443 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 KCNK9Q9NPC2 374 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 RBM22Q9NW64 420 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS11-201ENST00000524454 SYBUQ9NX95 663 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 SEPT3Q9UH03 358 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 MID2Q9UJV3 735 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CORO1CQ9ULV4 474 aaPredicted RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 RPS6KL1Q9Y6S9 549 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 NYNRINQ9P2P1 1898 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 MUC22E2RYF6 1773 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 LOC285095A0A1B0GVY8 99 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 CCDC189A1A4V9 331 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 TRIM49D1C9J1S8 452 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 COPEO14579 308 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 KDELR3O43731 214 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SNX3O60493 162 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 LILRB5O75023 590 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ADAM23O75077 832 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 GLRA3O75311 464 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 RFPL1O75677 317 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 KIAA0754O94854 1291 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 LMNAP02545 664 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 MPOP05164 745 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 HLA-DQB2P05538 268 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 APOA4P06727 396 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 FBXO45P0C2W1 286 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 COL6A2P12110 1019 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 HOXD9P28356 352 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 SLC6A4P31645 630 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 RPA3P35244 121 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 SLC26A3P40879 764 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 GRIA1P42261 906 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 GRIA2P42262 883 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 KIR2DL1P43626 348 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 MAPK8P45983 427 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SERPINB8P50452 374 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 CSRP3P50461 194 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SEC24CP53992 1094 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 WDR4P57081 412 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 SESN2P58004 480 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 GNA12Q03113 381 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ACVR1Q04771 509 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 CCDC15Q0P6D6 951 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 LBRQ14739 615 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 AGERQ15109 404 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SEPT7Q16181 437 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 CCDC6Q16204 474 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 KCTD19Q17RG1 926 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 GEN1Q17RS7 908 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ALFQ53S48 1182 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 HP1BP3Q5SSJ5 553 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 HHATQ5VTY9 493 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 FYB2Q5VWT5 728 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 NADSYN1Q6IA69 706 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 DENND5AQ6IQ26 1287 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ANO7Q6IWH7 933 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 PACS1Q6VY07 963 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 TP53INP2Q8IXH6 220 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 MPP5Q8N3R9 675 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 FRMD1Q8N878 549 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 TERB1Q8NA31 727 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 IL17RCQ8NAC3 791 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 OR52K1Q8NGK4 314 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 LRRC8CQ8TDW0 803 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 DDI1Q8WTU0 396 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 STON2Q8WXE9 905 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 IGSF8Q969P0 613 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 HMCESQ96FZ2 354 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SEC16BQ96JE7 1060 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SRPK1Q96SB4 655 aaKnown RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 RBBP8Q99708 897 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ARHGAP9Q9BRR9 750 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 IER2Q9BTL4 223 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 ACE2Q9BYF1 805 aaPredicted RBP7.11□□□□□ -1.27
VPS11-201ENST00000524454 SLC6A17Q9H1V8 727 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 TREX1Q9NSU2 369 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 NDFIP2Q9NV92 336 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 MPP6Q9NZW5 540 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 DEC1Q9P2X7 70 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 DCDC2Q9UHG0 476 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 GRID1Q9ULK0 1009 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 PLLPQ9Y342 182 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 TCAF1Q9Y4C2 921 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 GPSM3Q9Y4H4 160 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 PCDHGA2Q9Y5H1 932 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 SNX10Q9Y5X0 201 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 CEP192Q8TEP8 1941 aa7.11□□□□□ -1.27
VPS11-201ENST00000524454 RALGAPA1Q6GYQ0 2036 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 TTC24A2A3L6 582 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 MROH6A6NGR9 719 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms