RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PATE1Q8WXA2 126 aa25.96■■□□□ 1.75
PVT1-219ENST00000523427 ECHDC3Q96DC8 303 aa25.96■■□□□ 1.75
PVT1-219ENST00000523427 CCDC74BQ96LY2 380 aa25.96■■□□□ 1.75
PVT1-219ENST00000523427 TAAR2Q9P1P5 351 aa25.96■■□□□ 1.75
PVT1-219ENST00000523427 B4GALT6Q9UBX8 382 aa25.96■■□□□ 1.75
PVT1-219ENST00000523427 IGHV5-10-1A0A0J9YXX1 117 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 TPM2P07951 284 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 HOXC4P09017 264 aaPredicted RBP25.95■■□□□ 1.74
PVT1-219ENST00000523427 FGF3P11487 239 aaPredicted RBP25.95■■□□□ 1.74
PVT1-219ENST00000523427 CSNK1DP48730 415 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 ATP1A2P50993 1020 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 ILF3Q12906 894 aaKnown RBP eCLIP25.95■■□□□ 1.746e-8■■■□□ 15.7
PVT1-219ENST00000523427 KRT31Q15323 416 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 CA9Q16790 459 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 NRROSQ86YC3 692 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 PDCD6IPQ8WUM4 868 aaKnown RBP25.95■■□□□ 1.74
PVT1-219ENST00000523427 NKD1Q969G9 470 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 NUS1Q96E22 293 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 NSMCE3Q96MG7 304 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 GSDMCQ9BYG8 508 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 GEMIN8Q9NWZ8 242 aaKnown RBP25.95■■□□□ 1.74
PVT1-219ENST00000523427 DONSONQ9NYP3 566 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 AP4E1Q9UPM8 1137 aa25.95■■□□□ 1.74
PVT1-219ENST00000523427 MYCLP1P12525 358 aaPredicted RBP25.94■■□□□ 1.74
PVT1-219ENST00000523427 AIF1P55008 147 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 OGDHQ02218 1023 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 HEATR4Q86WZ0 1026 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 GPBAR1Q8TDU6 330 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 PTCD2Q8WV60 388 aaKnown RBP25.94■■□□□ 1.74
PVT1-219ENST00000523427 TAAR9Q96RI9 348 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 ZMYND15Q9H091 742 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 PHPT1Q9NRX4 125 aaPredicted RBP25.94■■□□□ 1.74
PVT1-219ENST00000523427 PCSK1NQ9UHG2 260 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 COL12A1Q99715 3063 aa25.94■■□□□ 1.74
PVT1-219ENST00000523427 TCRBV5S1A1TA0A578 114 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 FUCA1P04066 466 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 DESP17661 470 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 CD1CP29017 333 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 POLD2P49005 469 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 ARSDP51689 593 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 ART4Q93070 314 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 AGPAT1Q99943 283 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 SLC12A9Q9BXP2 914 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 SUFUQ9UMX1 484 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 DOPEY2Q9Y3R5 2298 aa25.93■■□□□ 1.74
PVT1-219ENST00000523427 SDK2Q58EX2 2172 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 CEACAM5P06731 702 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 SRSF1Q07955 248 aaKnown RBP eCLIP25.92■■□□□ 1.74
PVT1-219ENST00000523427 PPP6R3Q5H9R7 873 aaPredicted RBP25.92■■□□□ 1.74
PVT1-219ENST00000523427 BORAQ6PGQ7 559 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 DOK6Q6PKX4 331 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 NUP62CLQ9H1M0 184 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 SIK3Q9Y2K2 1263 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 PCDHGC4Q9Y5F7 938 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 B3GALT1Q9Y5Z6 326 aa25.92■■□□□ 1.74
PVT1-219ENST00000523427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.91■■□□□ 1.74
PVT1-219ENST00000523427 TRAFD1O14545 582 aaPredicted RBP25.91■■□□□ 1.74
PVT1-219ENST00000523427 HGSO14964 777 aaPredicted RBP25.91■■□□□ 1.74
PVT1-219ENST00000523427 ZW10O43264 779 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 LIFP15018 202 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 ERCC2P18074 760 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 PSMA2P25787 234 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 CSTF2P33240 577 aaKnown RBP eCLIP25.91■■□□□ 1.74
PVT1-219ENST00000523427 UGT1A3P35503 534 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 CNGA3Q16281 694 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 SKIDA1Q1XH10 827 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 PPP1R15BQ5SWA1 713 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 ZNF438Q7Z4V0 828 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 FAM129CQ86XR2 697 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 ARHGAP12Q8IWW6 846 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 TP53INP2Q8IXH6 220 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 NEK11Q8NG66 645 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 COQ10AQ96MF6 247 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 KCTD15Q96SI1 283 aaPredicted RBP25.91■■□□□ 1.74
PVT1-219ENST00000523427 PLEKHM1Q9Y4G2 1056 aa25.91■■□□□ 1.74
PVT1-219ENST00000523427 TRBV23OR9-2A0A075B6M9 112 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 TMCO5BA8MYB1 307 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 HTR7P34969 479 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 ETV3P41162 512 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 LIMK2P53671 638 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 CTBSQ01459 385 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 NSUN2Q08J23 767 aaKnown RBP eCLIP25.9■■□□□ 1.74
PVT1-219ENST00000523427 RFX8Q6ZV50 586 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 C17orf82Q86X59 251 aaPredicted RBP25.9■■□□□ 1.74
PVT1-219ENST00000523427 NPWQ8N729 165 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 SLC39A1Q9NY26 324 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 TMEM9Q9P0T7 183 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 SEPT3Q9UH03 358 aa25.9■■□□□ 1.74
PVT1-219ENST00000523427 ZFC3H1O60293 1989 aaKnown RBP25.89■■□□□ 1.74
PVT1-219ENST00000523427 PPM1DO15297 605 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 POLE2P56282 527 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 AP1S1P61966 158 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 IL10RBQ08334 325 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 SLC10A7Q0GE19 358 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 KCNAB2Q13303 367 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 PTPRRQ15256 657 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 RAET1GQ6H3X3 334 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 HSD11B1LQ7Z5J1 315 aa25.89■■□□□ 1.74
PVT1-219ENST00000523427 ZNF761Q86XN6 746 aaPredicted RBP25.89■■□□□ 1.74
PVT1-219ENST00000523427 NRSN1Q8IZ57 195 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms