RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 HERPUD2Q9BSE4 406 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 OSBPL8Q9BZF1 889 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 GLOD4Q9HC38 313 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 DNPEPQ9ULA0 475 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 PNMA8BQ9ULN7 279 aaPredicted RBP16.4■□□□□ 0.22
PABPC1-221ENST00000522720 PCDHGA1Q9Y5H4 931 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 PTPRBP23467 1997 aa16.4■□□□□ 0.22
PABPC1-221ENST00000522720 FAM221BA6H8Z2 402 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 CAPN8A6NHC0 703 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 HACD1B0YJ81 288 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ANKRD66B4E2M5 251 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 APOC4-APOC2K7ER74 178 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 FFAR2O15552 330 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ARHGAP6O43182 974 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 APOC2P02655 101 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 C1SP09871 688 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ZNF30P17039 623 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 CKMT2P17540 419 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 SPINK2P20155 84 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ETV3P41162 512 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 CETN2P41208 172 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 PPARDQ03181 441 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 XRCC4Q13426 336 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 PROX2Q3B8N5 592 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 HS1BP3Q53T59 392 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 FAXCQ5TGI0 409 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 LRRC66Q68CR7 880 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ENPP7Q6UWV6 458 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 Q6ZVL8 140 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 TECPR1Q7Z6L1 1165 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ZC3H18Q86VM9 953 aaKnown RBP16.39■□□□□ 0.21
PABPC1-221ENST00000522720 PHACTR4Q8IZ21 702 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 PELI3Q8N2H9 469 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 LPCAT1Q8NF37 534 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ATL2Q8NHH9 583 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 FUBP1Q96AE4 644 aaKnown RBP16.39■□□□□ 0.21
PABPC1-221ENST00000522720 HAUS1Q96CS2 278 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 NUS1Q96E22 293 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 LYSMD1Q96S90 227 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 RBM15Q96T37 977 aaKnown RBP eCLIP16.39■□□□□ 0.21
PABPC1-221ENST00000522720 ADGRE3Q9BY15 652 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 SLC13A1Q9BZW2 595 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 TCEAL2Q9H3H9 227 aaPredicted RBP16.39■□□□□ 0.21
PABPC1-221ENST00000522720 NLGN3Q9NZ94 848 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 SPASTQ9UBP0 616 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 NEUROG3Q9Y4Z2 214 aa16.39■□□□□ 0.21
PABPC1-221ENST00000522720 A0A0U1RQS6 177 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 MIF4GDA9UHW6 222 aaKnown RBP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 K7ESM1 405 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 CACNB4O00305 520 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 TPP1O14773 563 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 AQP9O43315 295 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 ALPPL2P10696 532 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 PYGMP11217 842 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 BLKP51451 505 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 HK3P52790 923 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 KIAA1024LP59773 190 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 PTSQ03393 145 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 DPTQ07507 201 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 DNAJC3Q13217 504 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 NOMO1Q15155 1222 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 SLC14A2Q15849 920 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 QPCTQ16769 361 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 ALG11Q2TAA5 492 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 RBFAQ8N0V3 343 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 UBL4BQ8N7F7 174 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 FAM181AQ8N9Y4 354 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 LMX1AQ8TE12 382 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 HTR3CQ8WXA8 447 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 TSACCQ96A04 125 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 WDR92Q96MX6 357 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 QKIQ96PU8 341 aaKnown RBP eCLIP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 TRIB3Q96RU7 358 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 VAT1Q99536 393 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 MLPHQ9BV36 600 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 DUSP23Q9BVJ7 150 aa16.38■□□□□ 0.21
PABPC1-221ENST00000522720 APOBEC3BQ9UH17 382 aaKnown RBP16.38■□□□□ 0.21
PABPC1-221ENST00000522720 LRP4O75096 1905 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 TMEM202A6NGA9 273 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 PDE2AO00408 941 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-221ENST00000522720 GCATO75600 419 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 TJP3O95049 919 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 RASGRP1O95267 797 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 FTCDO95954 541 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 CDK4P11802 303 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 TSHRP16473 764 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 KELP23276 732 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 TEAD1P28347 426 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 CD68P34810 354 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-221ENST00000522720 ACADVLP49748 655 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 STC1P52823 247 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 SRP54P61011 504 aaKnown RBP16.37■□□□□ 0.21
PABPC1-221ENST00000522720 OTUD4Q01804 1114 aaKnown RBP16.37■□□□□ 0.21
PABPC1-221ENST00000522720 ILKQ13418 452 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 CDKN3Q16667 212 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 CCDC157Q569K6 752 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 PRRT3Q5FWE3 981 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 CCDC181Q5TID7 509 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 AADACL2Q6P093 401 aa16.37■□□□□ 0.21
PABPC1-221ENST00000522720 RFLNAQ6ZTI6 216 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms