RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 EPHB1P54762 984 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CLDN6P56747 220 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 COPS2P61201 443 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 C1orf61Q13536 156 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CDKN3Q16667 212 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 ALG11Q2TAA5 492 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CCDC157Q569K6 752 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 MACC1Q6ZN28 852 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 MARCH9Q86YJ5 346 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CHCHD4Q8N4Q1 142 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CCDC112Q8NEF3 446 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 FAM174AQ8TBP5 190 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 PTCD2Q8WV60 388 aaKnown RBP17.87■□□□□ 0.45
CLK4-211ENST00000522556 TSACCQ96A04 125 aaPredicted RBP17.87■□□□□ 0.45
CLK4-211ENST00000522556 PDXPQ96GD0 296 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 OXNAD1Q96HP4 312 aaPredicted RBP17.87■□□□□ 0.45
CLK4-211ENST00000522556 HES6Q96HZ4 224 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 CNDP2Q96KP4 475 aaKnown RBP17.87■□□□□ 0.45
CLK4-211ENST00000522556 SLC25A51Q9H1U9 297 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 LZTFL1Q9NQ48 299 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 FTSJ1Q9UET6 329 aa17.87■□□□□ 0.45
CLK4-211ENST00000522556 R3HDM2Q9Y2K5 976 aaKnown RBP17.87■□□□□ 0.45
CLK4-211ENST00000522556 GOLGA6L3A6NEY3 463 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 TMEM202A6NGA9 273 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 H7C0C1 242 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 SIGLEC6O43699 453 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 PMPCBO75439 489 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 GCATO75600 419 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 CLDN7O95471 211 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 SOD1P00441 154 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 JUNDP17535 347 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 CES1P23141 567 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 ATP5OP48047 213 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 FOXK2Q01167 660 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 PTSQ03393 145 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 MTM1Q13496 603 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 NFATC4Q14934 902 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 CCDC181Q5TID7 509 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
CLK4-211ENST00000522556 TECPR1Q7Z6L1 1165 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 DCP2Q8IU60 420 aaKnown RBP17.86■□□□□ 0.45
CLK4-211ENST00000522556 PHACTR4Q8IZ21 702 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 SYCE1Q8N0S2 351 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 HTR3CQ8WXA8 447 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 EID2BQ96D98 161 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 AGAP2Q99490 1192 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 LRRC61Q9BV99 259 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 CLPBQ9H078 707 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 FGF22Q9HCT0 170 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 MRPL40Q9NQ50 206 aaKnown RBP17.86■□□□□ 0.45
CLK4-211ENST00000522556 KLHL8Q9P2G9 620 aaPredicted RBP17.86■□□□□ 0.45
CLK4-211ENST00000522556 KLK13Q9UKR3 277 aa17.86■□□□□ 0.45
CLK4-211ENST00000522556 STC1P52823 247 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 EIF3EP60228 445 aaKnown RBP17.85■□□□□ 0.45
CLK4-211ENST00000522556 YPEL5P62699 121 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 ARHGEF7Q14155 803 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 PNCKQ6P2M8 343 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 KDELC1Q6UW63 502 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 BZW1Q7L1Q6 419 aaKnown RBP17.85■□□□□ 0.45
CLK4-211ENST00000522556 OR1E3Q8WZA6 343 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 SCAMP4Q969E2 229 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 IFT43Q96FT9 208 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 CDC6Q99741 560 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 APOBEC3BQ9UH17 382 aaKnown RBP17.85■□□□□ 0.45
CLK4-211ENST00000522556 PLXNB3Q9ULL4 1909 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 EFR3BQ9Y2G0 817 aa17.85■□□□□ 0.45
CLK4-211ENST00000522556 MYLKQ15746 1914 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 LY6G6EA0A0G2JKS1 128 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 C1orf232A0A0U1RR37 186 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 GOLGA6CA6NDK9 693 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 MIF4GDA9UHW6 222 aaKnown RBP17.84■□□□□ 0.45
CLK4-211ENST00000522556 ENC1O14682 589 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 TNFSF14O43557 240 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 DKK1O94907 266 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 LDOC1O95751 146 aaPredicted RBP17.84■□□□□ 0.45
CLK4-211ENST00000522556 SLC4A1P02730 911 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 CCDC175P0C221 793 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 GOLGA6DP0CG33 693 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 RBP3P10745 1247 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 CHRNA4P43681 627 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.45
CLK4-211ENST00000522556 KLF1Q13351 362 aaPredicted RBP17.84■□□□□ 0.45
CLK4-211ENST00000522556 OLIG2Q13516 323 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 DEFB133Q30KQ1 61 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 PROX2Q3B8N5 592 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 INAVAQ3KP66 663 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 PRRT3Q5FWE3 981 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 ENPP7Q6UWV6 458 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 LYSMD3Q7Z3D4 306 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 RD3Q7Z3Z2 195 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 RAB44Q7Z6P3 723 aaPredicted RBP17.84■□□□□ 0.45
CLK4-211ENST00000522556 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 HEATR4Q86WZ0 1026 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 HID1Q8IV36 788 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 TXLNBQ8N3L3 684 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 RNF10Q8N5U6 811 aaKnown RBP17.84■□□□□ 0.45
CLK4-211ENST00000522556 OR4C6Q8NH72 309 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 LMX1AQ8TE12 382 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 WDR24Q96S15 920 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms