RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 DHRSXQ8N5I4 330 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 PCED1BQ96HM7 432 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 ACAT2Q9BWD1 397 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 RHOJQ9H4E5 214 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.2
PCDHA3-201ENST00000522353 PER2O15055 1255 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 PKMP14618 531 aaKnown RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 PPIBP23284 216 aaKnown RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 NUP62P37198 522 aaPredicted RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 EPS8Q12929 822 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 GPM6BQ13491 265 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 NOMO1Q15155 1222 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 C4orf32Q8N8J7 132 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 TEKT5Q96M29 485 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 LMAN2LQ9H0V9 348 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 MYLK2Q9H1R3 596 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 PCDHGC3Q9UN70 934 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 N6AMT1Q9Y5N5 214 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 PLIN4Q96Q06 1357 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 SERPINB7O75635 380 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 WARSP23381 471 aaKnown RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 L1CAMP32004 1257 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 CYP2R1Q6VVX0 501 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 C19orf18Q8NEA5 215 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 OR4K2Q8NGD2 314 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 CKAP2Q8WWK9 683 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 SERHL2Q9H4I8 314 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 RIBC2Q9H4K1 309 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 SERHLQ9NQF3 203 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 ARMCX1Q9P291 453 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 XPR1Q9UBH6 696 aa16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.19
PCDHA3-201ENST00000522353 ABHD14A-ACY1A0A1B0GW23 586 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 ACRP10323 421 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RAB14P61106 215 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 POU5F1Q01860 360 aaKnown RBP16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RFWD3Q6PCD5 774 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RNF44Q7L0R7 432 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 EXOC3L1Q86VI1 746 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 LRCH1Q9Y2L9 728 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RAP2CQ9Y3L5 183 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 PDE5AO76074 875 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 TNFAIP8O95379 198 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 FLT3P36888 993 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 MTAPQ13126 283 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 ZC3H7AQ8IWR0 971 aaKnown RBP16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 FAM25AB3EWG3 89 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 FAM25CB3EWG5 89 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 FAM25GB3EWG6 89 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 AZIN1O14977 448 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 CST3P01034 146 aaPredicted RBP16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 SNRPB2P08579 225 aaKnown RBP16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 ALPPL2P10696 532 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 CCNCP24863 283 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 ITGA1P56199 1179 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 LIPMQ5VYY2 423 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 TAF8Q7Z7C8 310 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 ULK2Q8IYT8 1036 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RNF148Q8N7C7 305 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 WFIKKN2Q8TEU8 576 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 RORBQ92753 470 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 SATB2Q9UPW6 733 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 AP3D1O14617 1153 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 HDAC3O15379 428 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 PAPSS1O43252 624 aaPredicted RBP16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 HGFP14210 728 aa16.26■□□□□ 0.19
PCDHA3-201ENST00000522353 IGLV3-22A0A075B6J6 115 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PEX10O60683 326 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ENPEPQ07075 957 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 METTL21AQ8WXB1 218 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PPIEQ9UNP9 301 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 C22orf31O95567 290 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PROCP04070 461 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ZNF276Q8N554 614 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 STYXQ8WUJ0 223 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SCLYQ96I15 445 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ASLP04424 464 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PBX3P40426 434 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 BNC1Q01954 994 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 DGKKQ5KSL6 1271 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ANKS1BQ7Z6G8 1248 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ZFRQ96KR1 1074 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 EXD2Q9NVH0 621 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 MFHAS1Q9Y4C4 1052 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PCDHGB3Q9Y5G1 929 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC38A8A6NNN8 435 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 RASGRP1O95267 797 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SP2Q02086 613 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 CACNG1Q06432 222 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 C11orf88Q6PI97 169 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms