RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TARSP26639 723 aaKnown RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 VIPR1P32241 457 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 HMGCLP35914 325 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 MMP12P39900 470 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 HADHAP40939 763 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 PSMD8P48556 350 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 NEK3P51956 506 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 COPAP53621 1224 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 SATB1Q01826 763 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 MGAT5Q09328 741 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 RASA2Q15283 850 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 CST6Q15828 149 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 SKIDA1Q1XH10 827 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 DPPA4Q7L190 304 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 LYSMD3Q7Z3D4 306 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 RIBC1Q8N443 379 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 OR13J1Q8NGT2 312 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 CDKL2Q92772 493 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 RAB7BQ96AH8 199 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ARRDC3Q96B67 414 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 NELL2Q99435 816 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 GPR63Q9BZJ6 419 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 NLE1Q9NVX2 485 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 SARDHQ9UL12 918 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ARL5AQ9Y689 179 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 C1orf232A0A0U1RR37 186 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 EXOC1LA0A1B0GW35 172 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 H7C0S8 307 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 SLC7A4O43246 635 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ADRB3P13945 408 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 TIMP2P16035 220 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 C5AR1P21730 350 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 CD72P21854 359 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ARNTP27540 789 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 HNF1BP35680 557 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ABL2P42684 1182 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ZNF844Q08AG5 666 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 CDKN3Q16667 212 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ESRP1Q6NXG1 681 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 TRMT10BQ6PF06 316 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 CES3Q6UWW8 571 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 KCNMB4Q86W47 210 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 TDRPQ86YL5 185 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 LMNTD2Q8IXW0 634 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 OSBPL6Q9BZF3 934 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ZFYVE1Q9HBF4 777 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
CPNE3-205ENST00000522240 NSMCE4AQ9NXX6 385 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 IL17CQ9P0M4 197 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 B4GALT6Q9UBX8 382 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 SLC2A6Q9UGQ3 507 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 SLC24A2Q9UI40 661 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 SCML1Q9UN30 329 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 PKP3Q9Y446 797 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 ZNF318Q5VUA4 2279 aa13.07□□□□□ -0.32
CPNE3-205ENST00000522240 H0Y858 1186 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 PSMD11O00231 422 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 AURKAO14965 403 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 STX7O15400 261 aaKnown RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 AP1G1O43747 822 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 LHCGRP22888 699 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 DRD3P35462 400 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 STC1P52823 247 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 PRAMEP78395 509 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 ARHGEF7Q14155 803 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 CNGA3Q16281 694 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 KBTBD12Q3ZCT8 623 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 LRRC66Q68CR7 880 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 KIAA1211LQ6NV74 962 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms