RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SSTR2P30874 369 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 RXRGP48443 463 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 METAP2P50579 478 aaKnown RBP eCLIP5.21□□□□□ -1.58
SKP1-208ENST00000521216 NANOS2P60321 138 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 BNC1Q01954 994 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 EGR4Q05215 589 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 LTBQ06643 244 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CSTF3Q12996 717 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 TRAF3Q13114 568 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 EIF4A2Q14240 407 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 EFNB3Q15768 340 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 USP41Q3LFD5 358 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 XKR9Q5GH70 373 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CXorf66Q5JRM2 361 aaPredicted RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 METTL2BQ6P1Q9 378 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 PDXDC1Q6P996 788 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 WDR63Q8IWG1 891 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CLIP4Q8N3C7 705 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 PGBD5Q8N414 524 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 OR14L1PQ8NHC6 308 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 NEK9Q8TD19 979 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CREB3L4Q8TEY5 395 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 FAM216AQ8WUB2 273 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 ARHGEF2Q92974 986 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 ZKSCAN4Q969J2 545 aaPredicted RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 PHF21BQ96EK2 531 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 METTL2AQ96IZ6 378 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 SLC41A2Q96JW4 573 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CSF3RQ99062 836 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 CHCHD6Q9BRQ6 235 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 ITPAQ9BY32 194 aa5.21□□□□□ -1.58
SKP1-208ENST00000521216 IFIH1Q9BYX4 1025 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 ESRP2Q9H6T0 727 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 RANGRFQ9HD47 186 aaPredicted RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 LAS1LQ9Y4W2 734 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 ATXN2Q99700 1313 aaKnown RBP5.21□□□□□ -1.58
SKP1-208ENST00000521216 A0A1W2PRG0 241 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 F5H0A9 414 aaPredicted RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 VCYO14598 125 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 ZBED4O75132 1171 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 SLC25A12O75746 678 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 PAPSS2O95340 614 aaPredicted RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 ACADMP11310 421 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 LAMP2P13473 410 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 THBS3P49746 956 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 COMPP49747 757 aaPredicted RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 DHX34Q14147 1143 aaKnown RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 MAPRE1Q15691 268 aaKnown RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 GGNBP1Q5YKI7 109 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 WDR73Q6P4I2 378 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 TAOK1Q7L7X3 1001 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 MED30Q96HR3 178 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 HARBI1Q96MB7 349 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 BARD1Q99728 777 aaKnown RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 HAUS8Q9BT25 410 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 PPP1R3EQ9H7J1 279 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 PLEKHA5Q9HAU0 1116 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 NOX4Q9NPH5 578 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 SEPT11Q9NVA2 429 aaKnown RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 ABI3Q9P2A4 366 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 SLCO3A1Q9UIG8 710 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 TTC7AQ9ULT0 858 aaPredicted RBP5.2□□□□□ -1.58
SKP1-208ENST00000521216 ADAM18Q9Y3Q7 739 aa5.2□□□□□ -1.58
SKP1-208ENST00000521216 RUSC2Q8N2Y8 1516 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 IGLV5-52A0A0A0MRZ9 124 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 LIPT2A6NK58 231 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 SOCS6O14544 535 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 AP3D1O14617 1153 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 WNT9BO14905 357 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 NDUFS7O75251 213 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 DDX58O95786 925 aaKnown RBP5.19□□□□□ -1.58
SKP1-208ENST00000521216 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 MAPK4P31152 587 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 PDLIM4P50479 330 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 PEX5P50542 639 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 ZSCAN23Q3MJ62 389 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 AMZ1Q400G9 498 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 SIGIRRQ6IA17 410 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 NCEH1Q6PIU2 408 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 PQLC2Q6ZP29 291 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 SPATA2LQ8IUW3 424 aaPredicted RBP5.19□□□□□ -1.58
SKP1-208ENST00000521216 ARHGAP12Q8IWW6 846 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 USP6NLQ92738 828 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 TIGD1Q96MW7 591 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 OR1F2PQ96R84 312 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 FIZ1Q96SL8 496 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 PCGF1Q9BSM1 259 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 TM6SF1Q9BZW5 370 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 BLOC1S4Q9NUP1 217 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 HCFC1R1Q9NWW0 138 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 MAU2Q9Y6X3 613 aa5.19□□□□□ -1.58
SKP1-208ENST00000521216 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 A0A0U1RQJ8 604 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 A0A1W2PQF6 199 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 C1orf226A1L170 272 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 MYO1GB0I1T2 1018 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 H3BQ06 376 aaPredicted RBP5.18□□□□□ -1.58
SKP1-208ENST00000521216 FCGR1AP12314 374 aa5.18□□□□□ -1.58
SKP1-208ENST00000521216 ZNF12P17014 697 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms