RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 FGF22Q9HCT0 170 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 MRPL40Q9NQ50 206 aaKnown RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 PHPT1Q9NRX4 125 aaPredicted RBP20.54■□□□□ 0.88
SNHG6-203ENST00000520944 THSD1Q9NS62 852 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 SATB2Q9UPW6 733 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 RAI2Q9Y5P3 530 aa20.54■□□□□ 0.88
SNHG6-203ENST00000520944 GOLGA6CA6NDK9 693 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 GOLGA6BA6NDN3 693 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 PSMD11O00231 422 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 MATN3O15232 486 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 MFSD11O43934 449 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 AKR1B10O60218 316 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 GOLGA6DP0CG33 693 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 ETV3P41162 512 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 GALNT2Q10471 571 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 IFI16Q16666 785 aaKnown RBP20.53■□□□□ 0.88
SNHG6-203ENST00000520944 NCBP2-AS2Q69YL0 99 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 CCDC74AQ96AQ1 378 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 GOLGA6AQ9NYA3 693 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 NENFQ9UMX5 172 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 ENTPD2Q9Y5L3 495 aa20.53■□□□□ 0.88
SNHG6-203ENST00000520944 SMG1Q96Q15 3661 aaKnown RBP20.53■□□□□ 0.88
SNHG6-203ENST00000520944 ASXL3Q9C0F0 2248 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 NPIPB15A6NHN6 443 aaPredicted RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 EIF4E1BA6NMX2 242 aaKnown RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 MYCLP1P12525 358 aaPredicted RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 CTPS1P17812 591 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 MX2P20592 715 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 CCNCP24863 283 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 EPHB1P54762 984 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 SOWAHCQ53LP3 525 aaPredicted RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 KCTD16Q68DU8 428 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 FOXR1Q6PIV2 292 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 HSD11B1LQ7Z5J1 315 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 CBARPQ8N350 705 aaPredicted RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 DTD2Q96FN9 168 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 NAF1Q96HR8 494 aaKnown RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 GFM1Q96RP9 751 aaKnown RBP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 DNAJC7Q99615 494 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 PACSIN1Q9BY11 444 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 TMEM168Q9H0V1 697 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 DPEP2Q9H4A9 486 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 RBM22Q9NW64 420 aaKnown RBP eCLIP20.52■□□□□ 0.88
SNHG6-203ENST00000520944 PPIL1Q9Y3C6 166 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 TTLL3Q9Y4R7 772 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 ATRXP46100 2492 aa20.52■□□□□ 0.88
SNHG6-203ENST00000520944 IGSF10Q6WRI0 2623 aa20.52■□□□□ 0.87
SNHG6-203ENST00000520944 SSU72P8A0A1W2PR75 194 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 PRSS38A1L453 326 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 TMX2-CTNND1H3BSU7 103 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 TAS2R40P59535 323 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 BROXQ5VW32 411 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 RAET1GQ6H3X3 334 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 Q6ZVL8 140 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 HEATR4Q86WZ0 1026 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 CPNE8Q86YQ8 564 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 SPACA3Q8IXA5 215 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 PELI3Q8N2H9 469 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 ARL14Q8N4G2 192 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.51■□□□□ 0.873e-18■□□□□ 9.6
SNHG6-203ENST00000520944 GPR156Q8NFN8 814 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 WDR36Q8NI36 951 aaKnown RBP20.51■□□□□ 0.87
SNHG6-203ENST00000520944 PIH1D2Q8WWB5 315 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 MAML1Q92585 1016 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 FATE1Q969F0 183 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 HIC2Q96JB3 615 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 SLC46A1Q96NT5 459 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 TSGA13Q96PP4 275 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 MCCC1Q96RQ3 725 aaPredicted RBP20.51■□□□□ 0.87
SNHG6-203ENST00000520944 TEX101Q9BY14 249 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 PRORYQ9H606 182 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 CARS2Q9HA77 564 aaKnown RBP20.51■□□□□ 0.87
SNHG6-203ENST00000520944 AMACRQ9UHK6 382 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 PCDHGA8Q9Y5G5 932 aa20.51■□□□□ 0.87
SNHG6-203ENST00000520944 BPTFQ12830 3046 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 NTN3O00634 580 aaPredicted RBP20.5■□□□□ 0.87
SNHG6-203ENST00000520944 MAP3K6O95382 1288 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 RPLP0P05388 317 aaKnown RBP20.5■□□□□ 0.87
SNHG6-203ENST00000520944 PDHA1P08559 390 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 TMEM253P0C7T8 217 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CCNB1P14635 433 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 GLB1P16278 677 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CA4P22748 312 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 LHCGRP22888 699 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 MAN1A1P33908 653 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CCL7P80098 99 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 TLE3Q04726 772 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 MESDQ14696 234 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 OGFOD3Q6PK18 319 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 IGF2-ASQ6U949 168 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 TSPAN33Q86UF1 283 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CCNYQ8ND76 341 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CCDC42Q96M95 316 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 ZNF830Q96NB3 372 aaPredicted RBP20.5■□□□□ 0.87
SNHG6-203ENST00000520944 FCRL3Q96P31 734 aaPredicted RBP20.5■□□□□ 0.87
SNHG6-203ENST00000520944 STRADBQ9C0K7 418 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 SUDS3Q9H7L9 328 aaPredicted RBP20.5■□□□□ 0.87
SNHG6-203ENST00000520944 RABGEF1Q9UJ41 708 aa20.5■□□□□ 0.87
SNHG6-203ENST00000520944 CCDC187A0A096LP49 1063 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 B4DGG1 531 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms