RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 GEN1Q17RS7 908 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 LACTB2Q53H82 288 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 SIRPB2Q5JXA9 342 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CES4AQ5XG92 561 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RNF43Q68DV7 783 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 KYAT3Q6YP21 454 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 CHST9Q7L1S5 443 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 NUDCD3Q8IVD9 361 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 WFDC5Q8TCV5 224 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ISL2Q96A47 359 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZNF599Q96NL3 588 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 MCMBPQ9BTE3 642 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ABCB8Q9NUT2 735 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 UBA2Q9UBT2 640 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 SLC27A6Q9Y2P4 619 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ILVBLA1L0T0 632 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 UBOX5O94941 541 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 LUC7L3O95232 432 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 BPGMP07738 259 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ATXN1LP0C7T5 689 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 SAT1P21673 171 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 GABRB3P28472 473 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 HLA-FP30511 346 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 TNFRSF4P43489 277 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 TMPRSS15P98073 1019 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 BST1Q10588 318 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CTBP1Q13363 440 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 GRM3Q14832 879 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RNF219Q5W0B1 726 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZC3HC1Q86WB0 502 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 C1orf210Q8IVY1 113 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 SPEM1Q8N4L4 309 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RFWD2Q8NHY2 731 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 C10orf82Q8WW14 230 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 EXOC2Q96KP1 924 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CIPCQ9C0C6 399 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZNF358Q9NW07 568 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 NSMCE4AQ9NXX6 385 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 SIRPGQ9P1W8 387 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 DCDC2Q9UHG0 476 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 SLC39A10Q9ULF5 831 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 KMT2EQ8IZD2 1858 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 A0A096LPK6 155 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 HEATR9A2RTY3 570 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CBX4O00257 560 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 GALR2O43603 387 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 KDELR3O43731 214 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 PLIN3O60664 434 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 PRKCGP05129 697 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 TROVE2P10155 538 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLK4-203ENST00000519583 PABPC1P11940 636 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 PAMP19021 973 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CD70P32970 193 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RGRP47804 291 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 SCTRP47872 440 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 PGGT1BP53609 377 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 IRF9Q00978 393 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 MSLNQ13421 630 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 THOC5Q13769 683 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZNF470Q6ECI4 717 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 KIAA0930Q6ICG6 404 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 CXorf57Q6NSI4 855 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZCCHC23Q6ZST2 131 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CNTN4Q8IWV2 1026 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 PLD6Q8N2A8 252 aaKnown RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 FITM2Q8N6M3 262 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZNF513Q8N8E2 541 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 ZNF557Q8N988 423 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 MGME1Q9BQP7 344 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 CINPQ9BW66 212 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 MUC3BQ9H195 1237 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RHOJQ9H4E5 214 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 RETREG1Q9H6L5 497 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 POLR3BQ9NW08 1133 aaPredicted RBP7.99□□□□□ -1.13
CLK4-203ENST00000519583 TMEM216Q9P0N5 145 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 HCN4Q9Y3Q4 1203 aa7.99□□□□□ -1.13
CLK4-203ENST00000519583 LOC285095A0A1B0GVY8 99 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 ATG13O75143 517 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 GSRP00390 522 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 AHSGP02765 367 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 SLC1A2P43004 574 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 CXCL12P48061 93 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 CCR3P51677 355 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 ACTN3Q08043 901 aaPredicted RBP7.98□□□□□ -1.13
CLK4-203ENST00000519583 LMAN2Q12907 356 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 GALNT3Q14435 633 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 ANGPT1Q15389 498 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 FASTKD1Q53R41 847 aaKnown RBP7.98□□□□□ -1.13
CLK4-203ENST00000519583 FSCBQ5H9T9 825 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 TSTD2Q5T7W7 516 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 SETD3Q86TU7 594 aaPredicted RBP7.98□□□□□ -1.13
CLK4-203ENST00000519583 TRIM42Q8IWZ5 723 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 BBS5Q8N3I7 341 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 FIBINQ8TAL6 211 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 IFT43Q96FT9 208 aa7.98□□□□□ -1.13
CLK4-203ENST00000519583 GPR22Q99680 433 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms