RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 UPF3AQ9H1J1 476 aaKnown RBP16.59■□□□□ 0.25
PCDHGA11-202ENST00000518882 CCM2LQ9NUG4 571 aaPredicted RBP16.59■□□□□ 0.25
PCDHGA11-202ENST00000518882 DSEQ9UL01 958 aa16.59■□□□□ 0.25
PCDHGA11-202ENST00000518882 AURKCQ9UQB9 309 aa16.59■□□□□ 0.25
PCDHGA11-202ENST00000518882 E9PAM4 449 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 SIX3O95343 332 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 S1PR4O95977 384 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CHRM3P20309 590 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CCR1P32246 355 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CD86P42081 329 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 STX1BP61266 288 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 TUBA4AP68366 448 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CTBSQ01459 385 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CAPRIN1Q14444 709 aaKnown RBP16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 GRB7Q14451 532 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 VPS26BQ4G0F5 336 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 BRMS1LQ5PSV4 323 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 OR6P1Q8NGX9 317 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 HM13Q8TCT9 377 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 HDAC10Q969S8 669 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 KLHL5Q96PQ7 755 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 TRMOQ9BU70 441 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 NT5MQ9NPB1 228 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 ABCD2Q9UBJ2 740 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 KCTD3Q9Y597 815 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 HS3ST4Q9Y661 456 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 SQORQ9Y6N5 450 aa16.58■□□□□ 0.25
PCDHGA11-202ENST00000518882 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 FXYD1O00168 92 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 TPST1O60507 370 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 OXTRP30559 389 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 HERVK_113P63132 956 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 UPP1Q16831 310 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 TBCELQ5QJ74 424 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 IRAK1BP1Q5VVH5 260 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC15A3Q8IY34 581 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 RTL3Q8N8U3 475 aaKnown RBP16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 IMP4Q96G21 291 aaKnown RBP16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 KCNA7Q96RP8 456 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 ERVK-6Q9BXR3 956 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC25A51Q9H1U9 297 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 OSER1Q9NX31 292 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC8A2Q9UPR5 921 aa16.58■□□□□ 0.24
PCDHGA11-202ENST00000518882 ANKRD12Q6UB98 2062 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 J3KR12 359 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 CDK14O94921 469 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 BMP10O95393 424 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC4A1P02730 911 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 MMP2P08253 660 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 MYL3P08590 195 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 BRCC3P46736 316 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 ADARP55265 1226 aaKnown RBP16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 ITKQ08881 620 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 LPIN1Q14693 890 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 OR10T2Q8NGX3 314 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 NSUN5Q96P11 429 aaKnown RBP16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 EBF1Q9UH73 591 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 PIP5K1BO14986 540 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 TIAL1Q01085 375 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 DSC2Q02487 901 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC10A7Q0GE19 358 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 PHYKPLQ8IUZ5 450 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 CLYBLQ8N0X4 340 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 SCML4Q8N228 414 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZUFSPQ96AP4 578 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 MUC3BQ9H195 1237 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 SMOC2Q9H3U7 446 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 TUBB1Q9H4B7 451 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 AGPAT4Q9NRZ5 378 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 CMTM6Q9NX76 183 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 CIDEBQ9UHD4 219 aa16.57■□□□□ 0.24
PCDHGA11-202ENST00000518882 A0A1B0GTL3 188 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 DHRS12A0PJE2 317 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 MROH6A6NGR9 719 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 STAMBPO95630 424 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 CD1DP15813 335 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 STT3AP46977 705 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 ATP6V0D1P61421 351 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 NFKB2Q00653 900 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZNF549Q6P9A3 640 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 AGMOQ6ZNB7 445 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 TFAP2DQ7Z6R9 452 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 SCD5Q86SK9 330 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZNF786Q8N393 782 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 RYBPQ8N488 228 aaPredicted RBP16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 MFSD2AQ8NA29 543 aa16.56■□□□□ 0.24
PCDHGA11-202ENST00000518882 TWIST2Q8WVJ9 160 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms