RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 LPCAT1Q8NF37 534 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 TLR10Q9BXR5 811 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 CARD9Q9H257 536 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 KCNF1Q9H3M0 494 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 MAGEE1Q9HCI5 957 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 KLHL8Q9P2G9 620 aaPredicted RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 KLF15Q9UIH9 416 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 DNPEPQ9ULA0 475 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 BTBD3Q9Y2F9 522 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 ANKRD36A6QL64 1941 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 C5orf60A6NFR6 353 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 CAPN8A6NHC0 703 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 PMPCBO75439 489 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ZNF189O75820 626 aaPredicted RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 NFKB1P19838 968 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 EPHA8P29322 1005 aaPredicted RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 STIP1P31948 543 aaKnown RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ETV3P41162 512 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 GRK6P43250 576 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 HNRNPKP61978 463 aaKnown RBP eCLIP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 FOXK2Q01167 660 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 DPTQ07507 201 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 PCSK7Q16549 785 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ZNF542PQ5EBM4 170 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ANKRD20A2Q5SQ80 823 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ANKRD20A1Q5TYW2 823 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ANKRD20A3Q5VUR7 823 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 LRRC66Q68CR7 880 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 DENND2CQ68D51 928 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 CCDC70Q6NSX1 233 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 ESRP1Q6NXG1 681 aaKnown RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 KDELC1Q6UW63 502 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 PARGQ86W56 976 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 PELI3Q8N2H9 469 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC35B2Q8TB61 432 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 BAHD1Q8TBE0 780 aaPredicted RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 DTD2Q96FN9 168 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 CDC6Q99741 560 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 DNAJC28Q9NX36 388 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 PNMA8BQ9ULN7 279 aaPredicted RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 R3HDM2Q9Y2K5 976 aaKnown RBP11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 OR1A2Q9Y585 309 aa11.15□□□□□ -0.62
SCARNA20-201ENST00000516768 NEMP2A6NFY4 417 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 KCNN4O15554 427 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 ZSCAN12O43309 604 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 PIAS2O75928 621 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 ANXA9O76027 345 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 NDST3O95803 873 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 PCCBP05166 539 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 NME1P15531 152 aaKnown RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 HTR1BP28222 390 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 STC1P52823 247 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 WNT3AP56704 352 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 SIM1P81133 766 aaPredicted RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 MPP3Q13368 585 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 RANBP10Q6VN20 620 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 MACC1Q6ZN28 852 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 RFLNAQ6ZTI6 216 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 NRSN1Q8IZ57 195 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 CCHCR1Q8TD31 782 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 BTN2A2Q8WVV5 523 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 FUBP1Q96AE4 644 aaKnown RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 EID2BQ96D98 161 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 NUS1Q96E22 293 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 OXNAD1Q96HP4 312 aaPredicted RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 MRGPRX2Q96LB1 330 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 LGR4Q9BXB1 951 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 TEX101Q9BY14 249 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 FRMD8P1Q9BZ68 369 aaPredicted RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 ABCG8Q9H221 673 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 CAAP1Q9H8G2 361 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 ZFYVE1Q9HBF4 777 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 UCKL1Q9NWZ5 548 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 RSPH14Q9UHP6 348 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 AAR2Q9Y312 384 aaKnown RBP11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 JRKLQ9Y4A0 524 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 CSNK1G3Q9Y6M4 447 aa11.14□□□□□ -0.63
SCARNA20-201ENST00000516768 TMEM131Q92545 1883 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 C1orf232A0A0U1RR37 186 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 MED19A0JLT2 244 aaPredicted RBP11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 RGSL1A5PLK6 1076 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 K7ESM1 405 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 PDE2AO00408 941 aaPredicted RBP11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 TNFRSF10CO14798 259 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 SCAMP1O15126 338 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 TNFSF14O43557 240 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 SDC3O75056 442 aa11.13□□□□□ -0.63
SCARNA20-201ENST00000516768 GCATO75600 419 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms