RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PELI3Q8N2H9 469 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 AGBL5Q8NDL9 886 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 PMEPA1Q969W9 287 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 CELF6Q96J87 481 aaKnown RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 PCDHB18PQ96TA0 734 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 DDA1Q9BW61 102 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 CINPQ9BW66 212 aaPredicted RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 EPN3Q9H201 632 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 SUDS3Q9H7L9 328 aaPredicted RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 PHPT1Q9NRX4 125 aaPredicted RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 TRNAU1APQ9NX07 287 aaKnown RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 TAAR2Q9P1P5 351 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 B3GALT1Q9Y5Z6 326 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 EEF1GP26641 437 aaKnown RBP15.76■□□□□ 0.11
LMNA-223ENST00000515459 CSTF2P33240 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMNA-223ENST00000515459 PAPOLAP51003 745 aaKnown RBP15.76■□□□□ 0.11
LMNA-223ENST00000515459 JAM2P57087 298 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 POLR2FP61218 127 aaKnown RBP15.76■□□□□ 0.11
LMNA-223ENST00000515459 NSUN2Q08J23 767 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMNA-223ENST00000515459 PEX6Q13608 980 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 DPCR1Q3MIW9 517 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 OR4D9Q8NGE8 314 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 ART4Q93070 314 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 NUS1Q96E22 293 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 CATSPER2Q96P56 530 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 ASPSCR1Q9BZE9 553 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 SLC39A8Q9C0K1 460 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 NLRC4Q9NPP4 1024 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
LMNA-223ENST00000515459 KCTD5Q9NXV2 234 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 DACH1Q9UI36 760 aa15.76■□□□□ 0.11
LMNA-223ENST00000515459 COL12A1Q99715 3063 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 ZNF891A8MT65 544 aaPredicted RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 TRAFD1O14545 582 aaPredicted RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 CAPN5O15484 640 aaPredicted RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 FUCA1P04066 466 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 CEACAM5P06731 702 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 AK4P27144 223 aaPredicted RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 GNPDA1P46926 289 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 SCNN1BP51168 640 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 UBE2HP62256 183 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 RPL7AP62424 266 aaKnown RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 SYCP1Q15431 976 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 CLEC16AQ2KHT3 1053 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 DNAJC24Q6P3W2 148 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 SLC30A9Q6PML9 568 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 HEATR4Q86WZ0 1026 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 NAGSQ8N159 534 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 PATE1Q8WXA2 126 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 COQ10AQ96MF6 247 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 DPYSL5Q9BPU6 564 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 CNPY3Q9BT09 278 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 TEX101Q9BY14 249 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 SP110Q9HB58 689 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 FAM207AQ9NSI2 230 aaPredicted RBP15.75■□□□□ 0.11
LMNA-223ENST00000515459 SLC39A1Q9NY26 324 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 B4GALT6Q9UBX8 382 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 ANAPC2Q9UJX6 822 aa15.75■□□□□ 0.11
LMNA-223ENST00000515459 IGHV1OR21-1A0A087WYE8 117 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 TCRBV5S1A1TA0A578 114 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 PPM1DO15297 605 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 RAD1O60671 282 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 THRAP10827 490 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 DESP17661 470 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 CASRP41180 1078 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 KLK7P49862 253 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 AP1S1P61966 158 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 FOXK1P85037 733 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 SQSTM1Q13501 440 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 RFTN1Q14699 578 aaPredicted RBP15.74■□□□□ 0.11
LMNA-223ENST00000515459 DCAF12Q5T6F0 453 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 NKAIN2Q5VXU1 208 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 MON1BQ7L1V2 547 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 LURAP1LQ8IV03 231 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 FRMD8Q9BZ67 464 aaPredicted RBP15.74■□□□□ 0.11
LMNA-223ENST00000515459 VPS16Q9H269 839 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 TAB2Q9NYJ8 693 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 SUFUQ9UMX1 484 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 FLNCQ14315 2725 aa15.74■□□□□ 0.11
LMNA-223ENST00000515459 B4E171 279 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
LMNA-223ENST00000515459 EEF2KO00418 725 aaKnown RBP15.73■□□□□ 0.11
LMNA-223ENST00000515459 GP1BBP13224 206 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 MPSTP25325 297 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 TSPAN7P41732 249 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 RENBPP51606 427 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 RAB15P59190 212 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 CDK3Q00526 305 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 CTBSQ01459 385 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 IL10RBQ08334 325 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 IGFBP7Q16270 282 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 CNGA3Q16281 694 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 DENND2CQ68D51 928 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 TMEM71Q6P5X7 295 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 DCUN1D2Q6PH85 259 aa15.73■□□□□ 0.11
LMNA-223ENST00000515459 FAM129CQ86XR2 697 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms