RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 SMN1Q16637 294 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SERTAD4-AS1Q5TG53 156 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ADGRG6Q86SQ4 1221 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SERPINA11Q86U17 422 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 OTUD6BQ8N6M0 293 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SCAIQ8N9R8 606 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 MIGA1Q8NAN2 632 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 PSPC1Q8WXF1 523 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 CNOT9Q92600 299 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 USP6NLQ92738 828 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SLX1AQ9BQ83 275 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 H2AFJQ9BTM1 129 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 HIPK3Q9H422 1215 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 DIAPH3Q9NSV4 1193 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 CLIC5Q9NZA1 410 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 NRXN2Q9P2S2 1712 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 CLSPNQ9HAW4 1339 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 NBPF19A0A087WUL8 3843 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 PABPN1LA6NDY0 278 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 HSPB6O14558 160 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 RNASEH2AO75792 299 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 MBD4O95243 580 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 EIF2S1P05198 315 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ACTN1P12814 892 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 RXRAP19793 462 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 Q0VFX4 171 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 TAF11Q15544 211 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 RUNDC3AQ59EK9 446 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 RAB41Q5JT25 222 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SH2D4BQ5SQS7 431 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF782Q6ZMW2 699 aaPredicted RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 HEATR4Q86WZ0 1026 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ARHGAP12Q8IWW6 846 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ZUFSPQ96AP4 578 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 URB1-AS1Q96HZ7 61 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 OR2A14Q96R47 310 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 CCDC68Q9H2F9 335 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 SMYD2Q9NRG4 433 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 THSD1Q9NS62 852 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 TUBA8Q9NY65 449 aaPredicted RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 AASSQ9UDR5 926 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 NDRG3Q9UGV2 375 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 INTS6Q9UL03 887 aaKnown RBP1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 A3GALT2U3KPV4 340 aa1.76□□□□□ -2.13
AC025539.1-201ENST00000515343 ZBED4O75132 1171 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 MT-CYBP00156 380 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 IGHDP01880 384 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 FGBP02675 491 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 SCP2P22307 547 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 GSTM2P28161 218 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 SHMT1P34896 483 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 GHRHRQ02643 423 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 GALNT2Q10471 571 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 MTX1Q13505 466 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 IL13RA2Q14627 380 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PLBD1Q6P4A8 553 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 CFAP77Q6ZQR2 320 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 RD3Q7Z3Z2 195 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 R3HCC1LQ7Z5L2 792 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 MRPL10Q7Z7H8 261 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 P3H2Q8IVL5 708 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 RBMXL3Q8N7X1 1067 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ANKRD52Q8NB46 1076 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 SLC38A9Q8NBW4 561 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ENGASEQ8NFI3 743 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 GABPB2Q8TAK5 448 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 WFIKKN2Q8TEU8 576 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ZNF622Q969S3 477 aaKnown RBP eCLIP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 OTULINQ96BN8 352 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 FBXL8Q96CD0 374 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PERPQ96FX8 193 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 SH2D3AQ9BRG2 576 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 SCAND2PQ9GZW5 306 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PDCL3Q9H2J4 239 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 CHMP4BQ9H444 224 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 AGO1Q9UL18 857 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ACSL5Q9ULC5 683 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 UBR3Q6ZT12 1888 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 AFDNP55196 1824 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 COL2A1P02458 1487 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 A0A0A0MQY5 61 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 A0A0U1RQJ8 604 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 TNPO2O14787 897 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 TIMM44O43615 452 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PLOD3O60568 738 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 FYNP06241 537 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 LDHCP07864 332 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 TMEM191BP0C7N4 346 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PCNAP12004 261 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 CNTFP26441 200 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 RGS2P41220 211 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 POLD2P49005 469 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PGGT1BP53609 377 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ID2Q02363 134 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 MAP2K1Q02750 393 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 CSTF3Q12996 717 aaKnown RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 PDE1CQ14123 709 aaPredicted RBP1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 LPIN1Q14693 890 aa1.75□□□□□ -2.13
AC025539.1-201ENST00000515343 ME3Q16798 604 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms