RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 PRSS53Q2L4Q9 553 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 ZNF284Q2VY69 593 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 ARL13BQ3SXY8 428 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 CCDC14Q49A88 953 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 RAB6CQ53S08 254 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 PRRT3Q5FWE3 981 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 SFMBT2Q5VUG0 894 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 CDKAL1Q5VV42 579 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 RWDD4Q6NW29 188 aaKnown RBP9.59□□□□□ -0.87
TRIO-220ENST00000512979 NEK5Q6P3R8 708 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 SASS6Q6UVJ0 657 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 KANSL1Q7Z3B3 1105 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 TMPRSS12Q86WS5 348 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 PCDH20Q8N6Y1 951 aaKnown RBP9.59□□□□□ -0.87
TRIO-220ENST00000512979 SLC30A5Q8TAD4 765 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 PPP1R16AQ96I34 528 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 HDAC8Q9BY41 377 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 RAB6CQ9H0N0 254 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 PPARGC1AQ9UBK2 798 aaKnown RBP9.59□□□□□ -0.87
TRIO-220ENST00000512979 TRAF6Q9Y4K3 522 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 ACTL7AQ9Y615 435 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
TRIO-220ENST00000512979 WDFY3Q8IZQ1 3526 aa9.59□□□□□ -0.88
TRIO-220ENST00000512979 TP53BP1Q12888 1972 aaPredicted RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 C2CD4BA6NLJ0 364 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 KATNA1O75449 491 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 RASGRP1O95267 797 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 CDK4P11802 303 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 GLB1P16278 677 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 HNRNPA2B1P22626 353 aaKnown RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 ADRA1BP35368 520 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 HNF1BP35680 557 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 IGFALSP35858 605 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 ACVRL1P37023 503 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 STAT1P42224 750 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 NSFP46459 744 aaKnown RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 CCNHP51946 323 aaPredicted RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 NEK3P51956 506 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 CLDN2P57739 230 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 SEPT7Q16181 437 aaKnown RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 CARD16Q5EG05 197 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 HES3Q5TGS1 186 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 SEL1L3Q68CR1 1132 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 TRIM72Q6ZMU5 477 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 TMC3Q7Z5M5 1100 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 SVOPQ8N4V2 548 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 JOSD2Q8TAC2 188 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 GPT2Q8TD30 523 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 C1orf159Q96HA4 380 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 MAGEB10Q96LZ2 347 aaPredicted RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 PCDHB18PQ96TA0 734 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 HEPHQ9BQS7 1158 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 YIPF2Q9BWQ6 316 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 CALN1Q9BXU9 219 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 CEP41Q9BYV8 373 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 TM6SF2Q9BZW4 377 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 PRR13Q9NZ81 148 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 DKK4Q9UBT3 224 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 OR12D3Q9UGF7 316 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 DNAI1Q9UI46 699 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 SIK3Q9Y2K2 1263 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 DAAM1Q9Y4D1 1078 aa9.58□□□□□ -0.88
TRIO-220ENST00000512979 COL5A1P20908 1838 aaPredicted RBP9.58□□□□□ -0.88
TRIO-220ENST00000512979 URB1O60287 2271 aaKnown RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 FAM72CH0Y354 149 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 TRIM38O00635 465 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 SIGLEC6O43699 453 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 PLEKP08567 350 aaPredicted RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 JMJD7P0C870 316 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 KRT3P12035 628 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 UNGP13051 313 aaPredicted RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 ADRB3P13945 408 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 CKMT2P17540 419 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 ITGB7P26010 798 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 PTPN9P43378 593 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 COPB1P53618 953 aaKnown RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 HDAC4P56524 1084 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 PTP4A2Q12974 167 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 CDK5R2Q13319 367 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 ILKQ13418 452 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 SYCP1Q15431 976 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 DPY19L1Q2PZI1 675 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 COL28A1Q2UY09 1125 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 HS1BP3Q53T59 392 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 SLC35F1Q5T1Q4 408 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 FAM72AQ5TYM5 149 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 MANEALQ5VSG8 457 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 FAM72DQ6L9T8 149 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 GCNT7Q6ZNI0 430 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 CLEC17AQ6ZS10 378 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 RBM43Q6ZSC3 357 aaKnown RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 LHFPL2Q6ZUX7 228 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 STRADAQ7RTN6 431 aa9.57□□□□□ -0.88
TRIO-220ENST00000512979 MAMDC2Q7Z304 686 aaPredicted RBP9.57□□□□□ -0.88
TRIO-220ENST00000512979 PTAR1Q7Z6K3 402 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms