RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 ILF3Q12906 894 aaKnown RBP eCLIP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 PEX6Q13608 980 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 SLC18A3Q16572 532 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 C3orf38Q5JPI3 329 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 PGBD5Q8N414 524 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 TEX26Q8N6G2 289 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 KYQ8NBH2 561 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 WDR36Q8NI36 951 aaKnown RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 KIAA1524Q8TCG1 905 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 CCDC74AQ96AQ1 378 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 NAF1Q96HR8 494 aaKnown RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 HIC2Q96JB3 615 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 CCDC42Q96M95 316 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 ZNF830Q96NB3 372 aaPredicted RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 GFM1Q96RP9 751 aaKnown RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 UBL7Q96S82 380 aaPredicted RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 SEMA3CQ99985 751 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 ZNF670Q9BS34 389 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
YIPF3-216ENST00000512713 STRADBQ9C0K7 418 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 CYP4F12Q9HCS2 524 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 NT5MQ9NPB1 228 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 GOLGA6AQ9NYA3 693 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 AMACRQ9UHK6 382 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 DNPEPQ9ULA0 475 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 SATB2Q9UPW6 733 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 PCDHGA8Q9Y5G5 932 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 RAI2Q9Y5P3 530 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 IGSF10Q6WRI0 2623 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 KNTC1P50748 2209 aa9.2□□□□□ -0.94
YIPF3-216ENST00000512713 URB1O60287 2271 aaKnown RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CCDC187A0A096LP49 1063 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 PRSS38A1L453 326 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 NPIPB15A6NHN6 443 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 MATN3O15232 486 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 RPLP0P05388 317 aaKnown RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CD48P09326 243 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CCNB1P14635 433 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 HOXB3P14651 431 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 GLB1P16278 677 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CCNCP24863 283 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 MAN1A1P33908 653 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ETV3P41162 512 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 TRAF2Q12933 501 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 BIRC2Q13490 618 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 DPYSL3Q14195 570 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 PAFAH1B3Q15102 231 aaKnown RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CNGA3Q16281 694 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 IFI16Q16666 785 aaKnown RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 SOWAHCQ53LP3 525 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ANKRD20A8PQ5CZ79 823 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 IGF2-ASQ6U949 168 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 Q6ZVL8 140 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 GPR155Q7Z3F1 870 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 HSD11B1LQ7Z5J1 315 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 HEATR4Q86WZ0 1026 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 SPACA3Q8IXA5 215 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 Q8N9G6 341 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CCNYQ8ND76 341 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 FAM71BQ8TC56 605 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 KCNE4Q8WWG9 221 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 FATE1Q969F0 183 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 DTD2Q96FN9 168 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 NSMCE3Q96MG7 304 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 SLC46A1Q96NT5 459 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 FCRL3Q96P31 734 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 TSGA13Q96PP4 275 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 MCCC1Q96RQ3 725 aaPredicted RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 LGR4Q9BXB1 951 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 DPH1Q9BZG8 443 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ZMYND15Q9H091 742 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 TMEM168Q9H0V1 697 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 CARS2Q9HA77 564 aaKnown RBP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 EPB41L5Q9HCM4 733 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 RBM22Q9NW64 420 aaKnown RBP eCLIP9.19□□□□□ -0.94
YIPF3-216ENST00000512713 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 TTLL3Q9Y4R7 772 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 ENTPD2Q9Y5L3 495 aa9.19□□□□□ -0.94
YIPF3-216ENST00000512713 SSU72P8A0A1W2PR75 194 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 B4DGG1 531 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 NTN3O00634 580 aaPredicted RBP9.18□□□□□ -0.94
YIPF3-216ENST00000512713 PLD2O14939 933 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 KLK10O43240 276 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 NUDT21O43809 227 aaKnown RBP9.18□□□□□ -0.94
YIPF3-216ENST00000512713 MFSD11O43934 449 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 PLXNA2O75051 1894 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 TNFSF15O95150 251 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 PYGLP06737 847 aa9.18□□□□□ -0.94
YIPF3-216ENST00000512713 TMEM253P0C7T8 217 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms