RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CAPN8A6NHC0 703 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 BUD23O43709 281 aaKnown RBP24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 EIF4HQ15056 248 aaKnown RBP24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 CTC1Q2NKJ3 1217 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 ACCSLQ4AC99 568 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 ZNF789Q5FWF6 425 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 ATG16L1Q676U5 607 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 TANGO2Q6ICL3 276 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 FAM45BPQ6NSW5 357 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 MICALCLQ6ZW33 695 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 NUDCD3Q8IVD9 361 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 SLC41A1Q8IVJ1 513 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 RYBPQ8N488 228 aaPredicted RBP24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 CCDC197Q8NCU1 140 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 OR6K2Q8NGY2 324 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 RDH11Q8TC12 318 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 FAM45AQ8TCE6 357 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 ELMO2Q96JJ3 720 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 MCCC1Q96RQ3 725 aaPredicted RBP24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 GPR63Q9BZJ6 419 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 POPDC3Q9HBV1 291 aa24.33■■□□□ 1.49
SPOCK3-221ENST00000512648 CCL22O00626 93 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 PFDN6O15212 129 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ARSAP15289 507 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 CD9P21926 228 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 RECQLP46063 649 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 SLC12A2P55011 1212 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 POLR2LP62875 67 aaKnown RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 XIAPP98170 497 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 TSNAXIP1Q2TAA8 658 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 RNF187Q5TA31 235 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 FOXR1Q6PIV2 292 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 C6orf89Q6UWU4 347 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 RAPH1Q70E73 1250 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 PLD6Q8N2A8 252 aaKnown RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 HEPHQ9BQS7 1158 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 PLCD4Q9BRC7 762 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ZFYVE1Q9HBF4 777 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 USP15Q9Y4E8 981 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 WDR91A4D1P6 747 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 TRIM24O15164 1050 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 WISP3O95389 354 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 TGDSO95455 350 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 F7P08709 466 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 HNF1BP35680 557 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 SUOXP51687 545 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 PTPRNQ16849 979 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 AARS2Q5JTZ9 985 aaKnown RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 HECTD2Q5U5R9 776 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 VITQ6UXI7 678 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 TPRG1Q6ZUI0 275 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 CEP97Q8IW35 865 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 OTUD6BQ8N6M0 293 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ANKS4BQ8N8V4 417 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ELSPBP1Q96BH3 223 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 EID2BQ96D98 161 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 RIPOR3Q96MK2 946 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 TSNARE1Q96NA8 513 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 SMIM14Q96QK8 99 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 APOL5Q9BWW9 433 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 PRO3102Q9H379 93 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 EBF3Q9H4W6 596 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ZNF576Q9H609 170 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 NMRAL1Q9HBL8 299 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 HPS4Q9NQG7 708 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 POLR3BQ9NW08 1133 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 ELOVL2Q9NXB9 296 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 DEC1Q9P2X7 70 aa24.32■■□□□ 1.48
SPOCK3-221ENST00000512648 CHD9Q3L8U1 2897 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 TSPAN11A1L157 253 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 KLHL2O95198 593 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 TOP3BO95985 862 aaKnown RBP24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 GKP32189 559 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 TTPAP49638 278 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 ADARP55265 1226 aaKnown RBP24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 PEX6Q13608 980 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 SEMA3AQ14563 771 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 COL19A1Q14993 1142 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 GRAMD4Q6IC98 578 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 C16orf46Q6P387 395 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 BRAT1Q6PJG6 821 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 GDPD4Q6W3E5 623 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 LYSMD3Q7Z3D4 306 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 SPATA21Q7Z572 469 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 C12orf40Q86WS4 652 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 GPATCH11Q8N954 259 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 GPR78Q96P69 363 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 OSBPL1AQ9BXW6 950 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 COPG2Q9UBF2 871 aa24.31■■□□□ 1.48
SPOCK3-221ENST00000512648 C2orf16Q68DN1 1984 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 CPA3P15088 417 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 CTPS1P17812 591 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 POU3F3P20264 500 aaPredicted RBP24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 PMLP29590 882 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 EIF2DP41214 584 aaKnown RBP24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 MTHFRP42898 656 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 KPNA2P52292 529 aaKnown RBP24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 RBM20Q5T481 1227 aaKnown RBP24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 CGB2Q6NT52 195 aa24.3■■□□□ 1.48
SPOCK3-221ENST00000512648 CERS6Q6ZMG9 384 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms