RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ARHGEF26Q96DR7 871 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 SLC2A13Q96QE2 648 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ZPBPQ9BS86 351 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ATP13A1Q9HD20 1204 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 SIDT1Q9NXL6 827 aaKnown RBP9.14□□□□□ -0.95
NUP54-211ENST00000512151 TACC2O95359 2948 aa9.14□□□□□ -0.95
NUP54-211ENST00000512151 ZSCAN5CA6NGD5 496 aaPredicted RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 CALUO43852 315 aaPredicted RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 ZG16O60844 167 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 GRAP2O75791 330 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PSMC2P35998 433 aaKnown RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 ACVRL1P37023 503 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 STX17P56962 302 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 SLC20A2Q08357 652 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 NME3Q13232 169 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PLEKHN1Q494U1 663 aaPredicted RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 ANO6Q4KMQ2 910 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 KLHL10Q6JEL2 608 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 RETSATQ6NUM9 610 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 GDPD4Q6W3E5 623 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 MLKLQ8NB16 471 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 NELFBQ8WX92 580 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PNPLA2Q96AD5 504 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 ISG20Q96AZ6 181 aaKnown RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 DHTKD1Q96HY7 919 aaPredicted RBP9.13□□□□□ -0.95
NUP54-211ENST00000512151 ULBP3Q9BZM4 244 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 GRPEL1Q9HAV7 217 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 MOSPD1Q9UJG1 213 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PHTF1Q9UMS5 762 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 CTNND2Q9UQB3 1225 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 COQ4Q9Y3A0 265 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 PCDHB4Q9Y5E5 795 aa9.13□□□□□ -0.95
NUP54-211ENST00000512151 ILVBLA1L0T0 632 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 PRSS38A1L453 326 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ARGFXA6NJG6 315 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 POLR1CO15160 346 aaPredicted RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 INPP4BO15327 924 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 LRRTM2O43300 516 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 POP4O95707 220 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 GSRP00390 522 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 SNRPB2P08579 225 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 TFE3P19532 575 aaPredicted RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 OR1E1P30953 314 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ITGA1P56199 1179 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 DNASE1L3Q13609 305 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 STX1AQ16623 288 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 NFIL3Q16649 462 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 SLC30A9Q6PML9 568 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 SLC47A2Q86VL8 602 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 OR2AP1Q8NGE2 309 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 CT55Q8WUE5 264 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 ARHGEF2Q92974 986 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 DPYSL5Q9BPU6 564 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 THAP9Q9H5L6 903 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 PCDH12Q9NPG4 1184 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 PIGVQ9NUD9 493 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ANO10Q9NW15 660 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 NTNG1Q9Y2I2 539 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 PLEKHM1Q9Y4G2 1056 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 PCDHGA6Q9Y5G7 932 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 MDC1Q14676 2089 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 IGLV3-10A0A075B6K4 115 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 CACNB4O00305 520 aaPredicted RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 INSIG1O15503 277 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 DPM1O60762 260 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 LRCH4O75427 683 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 CEACAM4O75871 244 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 KIAA0754O94854 1291 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 GM2AP17900 193 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 MAN1A1P33908 653 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 STAT1P42224 750 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ACADSBP45954 432 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 LIG3P49916 1009 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 RPS18P62269 152 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 GNA12Q03113 381 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 CDK18Q07002 472 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ADAM9Q13443 819 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 IL10RAQ13651 578 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 AGERQ15109 404 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 STILQ15468 1287 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ZNF517Q6ZMY9 492 aaPredicted RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 GDF7Q7Z4P5 450 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 TMEM110Q86TL2 294 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 GAS2L3Q86XJ1 694 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 FDCSPQ8NFU4 85 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 NUDT9Q9BW91 350 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 OSBPL1AQ9BXW6 950 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms