RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ERVW-1Q9UQF0 538 aa9.14□□□□□ -0.95
NR1I3-230ENST00000511944 RAI2Q9Y5P3 530 aa9.14□□□□□ -0.95
NR1I3-230ENST00000511944 SHROOM3Q8TF72 1996 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CEP290O15078 2479 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TSPAN11A1L157 253 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ANKRD66B4E2M5 251 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 POC1B-GALNT4F8VUJ3 575 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 H7C0S8 307 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TRAFD1O14545 582 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 SCAMP3O14828 347 aaKnown RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TM9SF1O15321 606 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ZNF821O75541 412 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 PGLSO95336 258 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 PRLP01236 227 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 KRT15P19012 456 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MPSTP25325 297 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 GBP2P32456 591 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 SPRP35270 261 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 RECQLP46063 649 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ARCN1P48444 511 aaKnown RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 LIMK2P53671 638 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ST8SIA6P61647 398 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 POLR2LP62875 67 aaKnown RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CRADDP78560 199 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 IHHQ14623 411 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 POU6F1Q14863 301 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TMED2Q15363 201 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 PCSK7Q16549 785 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 GAB4Q2WGN9 574 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MYLK3Q32MK0 819 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ITPRIPL2Q3MIP1 535 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CARD16Q5EG05 197 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 HP1BP3Q5SSJ5 553 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ZDHHC20Q5W0Z9 365 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TANGO2Q6ICL3 276 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 LINGO4Q6UY18 593 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ATCAYQ86WG3 371 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TERB1Q8NA31 727 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TTC16Q8NEE8 873 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 BHMTQ93088 406 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ASIC4Q96FT7 647 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 MYADMQ96S97 322 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TCF12Q99081 682 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 TRMT61BQ9BVS5 477 aaKnown RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CHRAC1Q9NRG0 131 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 NLE1Q9NVX2 485 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ELOVL2Q9NXB9 296 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-230ENST00000511944 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CLEC4EQ9ULY5 219 aa9.13□□□□□ -0.95
NR1I3-230ENST00000511944 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 ARNTLO00327 626 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 PFDN6O15212 129 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 LDB2O43679 373 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 RPP40O75818 363 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 MT-CO1P00395 513 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 BMP4P12644 408 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 GLULP15104 373 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 CCNFP41002 786 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 CHRNA4P43681 627 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 HTR4Q13639 388 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 RAB44Q7Z6P3 723 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-230ENST00000511944 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-230ENST00000511944 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms