RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CCDC91Q7Z6B0 441 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 NDUFAF2Q8N183 169 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 GPR150Q8NGU9 434 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 UHMK1Q8TAS1 419 aaKnown RBP9.14□□□□□ -0.95
NR1I3-228ENST00000511676 STYXQ8WUJ0 223 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 UCMAQ8WVF2 138 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 ISL2Q96A47 359 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF669Q96BR6 464 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-228ENST00000511676 CENPTQ96BT3 561 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 ECHDC3Q96DC8 303 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 MYO19Q96H55 970 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 SPACA7Q96KW9 195 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 CNTNAP3BQ96NU0 1288 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 P2RY13Q9BPV8 354 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 MCMBPQ9BTE3 642 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 OSBPL1AQ9BXW6 950 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 CNTNAP3Q9BZ76 1288 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 MAGEE1Q9HCI5 957 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 TXNDC16Q9P2K2 825 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 DEC1Q9P2X7 70 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 NOVA2Q9UNW9 492 aaKnown RBP9.14□□□□□ -0.95
NR1I3-228ENST00000511676 ERVW-1Q9UQF0 538 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 RAI2Q9Y5P3 530 aa9.14□□□□□ -0.95
NR1I3-228ENST00000511676 SHROOM3Q8TF72 1996 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TSPAN11A1L157 253 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ANKRD66B4E2M5 251 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 POC1B-GALNT4F8VUJ3 575 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 H7C0S8 307 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ARNTLO00327 626 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TRAFD1O14545 582 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 SCAMP3O14828 347 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 AXIN1O15169 862 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TM9SF1O15321 606 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 HRO43593 1189 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF821O75541 412 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 PGLSO95336 258 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TRIM16O95361 564 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 PRLP01236 227 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 KRT15P19012 456 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 SPRP35270 261 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 HOXD12P35452 270 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 RECQLP46063 649 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ARCN1P48444 511 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 FNTBP49356 437 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 LIMK2P53671 638 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ST8SIA6P61647 398 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 POLR2LP62875 67 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CRADDP78560 199 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 SATB1Q01826 763 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 IHHQ14623 411 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 POU6F1Q14863 301 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 PON2Q15165 354 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TMED2Q15363 201 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 PCSK7Q16549 785 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 GAB4Q2WGN9 574 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 MYLK3Q32MK0 819 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CARD16Q5EG05 197 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TMEM196Q5HYL7 178 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 HP1BP3Q5SSJ5 553 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ZDHHC20Q5W0Z9 365 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 LINGO4Q6UY18 593 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TERB1Q8NA31 727 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TTC16Q8NEE8 873 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CEP76Q8TAP6 659 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 BHMTQ93088 406 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 TCF12Q99081 682 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 POLMQ9NP87 494 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CHRAC1Q9NRG0 131 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 NLE1Q9NVX2 485 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ELOVL2Q9NXB9 296 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CLEC4EQ9ULY5 219 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
NR1I3-228ENST00000511676 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
NR1I3-228ENST00000511676 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PFDN6O15212 129 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 LDB2O43679 373 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 MT-CO1P00395 513 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CEACAM1P13688 526 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms