RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 SLC38A8A6NNN8 435 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 A8MT66 165 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SDHDO14521 159 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CD3EAPO15446 510 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 ACSL4O60488 711 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ZMPSTE24O75844 475 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 NDST3O95803 873 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SOD2P04179 222 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ATXN1LP0C7T5 689 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 ZDHHC11BP0C7U3 371 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ME2P23368 584 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 ETFBP38117 255 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ATP4BP51164 291 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 IRX1P78414 480 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 RTP2Q5QGT7 225 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 HPS6Q86YV9 775 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TMEM126BQ8IUX1 230 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 LGI2Q8N0V4 545 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SPATA6LQ8N4H0 392 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 PYDC1Q8WXC3 89 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 OVCA2Q8WZ82 227 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CCDC124Q96CT7 223 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 RCN3Q96D15 328 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 L3HYPDHQ96EM0 354 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 PPP1R36Q96LQ0 422 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 YME1L1Q96TA2 773 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 DDX50Q9BQ39 737 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 LBHD1Q9BQE6 289 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 NACA2Q9H009 215 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 MEAF6Q9HAF1 191 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SYTL2Q9HCH5 934 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 MAFFQ9ULX9 164 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 PSMD13Q9UNM6 376 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ARIH1Q9Y4X5 557 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 COPG1Q9Y678 874 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 SLC4A7Q9Y6M7 1214 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 CASQ2O14958 399 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 UBDO15205 165 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CFLARO15519 480 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 LDB2O43679 373 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 BUD23O43709 281 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 TLR5O60602 858 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TBX18O95935 607 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 ENO3P13929 434 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 FDXRP22570 491 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 PMLP29590 882 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CCR10P46092 362 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TUFMP49411 452 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 INHBCP55103 352 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CDH4P55283 916 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 OXCT1P55809 520 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 NFKB2Q00653 900 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 GNA12Q03113 381 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SULT2A1Q06520 285 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TCHHL1Q5QJ38 904 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 CHSY3Q70JA7 882 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TMCO2Q7Z6W1 182 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 KBTBD6Q86V97 674 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 BLOC1S5Q8TDH9 187 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 GDPD5Q8WTR4 605 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SPDL1Q96EA4 605 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CDRT15Q96T59 188 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CINPQ9BW66 212 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 TTLL2Q9BWV7 592 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 Q9H521 79 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TFB2MQ9H5Q4 396 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 WDR41Q9HAD4 459 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 CATSPERZQ9NTU4 200 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 INTS10Q9NVR2 710 aaKnown RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 UBA2Q9UBT2 640 aaPredicted RBP9.45□□□□□ -0.9
SUB1-209ENST00000511615 LZTS1Q9Y250 596 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 SLC27A5Q9Y2P5 690 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 TRAF6Q9Y4K3 522 aa9.45□□□□□ -0.9
SUB1-209ENST00000511615 NLRC5Q86WI3 1866 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 TRIM38O00635 465 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 AURKAO14965 403 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 CLDN11O75508 207 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 ABLIM3O94929 683 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 STAMBPO95630 424 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 GOT2P00505 430 aaKnown RBP9.44□□□□□ -0.9
SUB1-209ENST00000511615 C1RP00736 705 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 HNRNPLP14866 589 aaKnown RBP eCLIP9.44□□□□□ -0.9
SUB1-209ENST00000511615 ACVRL1P37023 503 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 SUOXP51687 545 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 STX1BP61266 288 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 ATP6V0D1P61421 351 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 CDC16Q13042 620 aa9.44□□□□□ -0.9
SUB1-209ENST00000511615 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms