RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 PQBP1O60828 265 aaKnown RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 STC2O76061 302 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 CD1DP15813 335 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 RGRP47804 291 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 SCNN1BP51168 640 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 SUOXP51687 545 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 ZNF140P52738 457 aaPredicted RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 STC1P52823 247 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 NFKB2Q00653 900 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 KLC1Q07866 573 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 TYSND1Q2T9J0 566 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 KIAA1841Q6NSI8 718 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 RPS27LQ71UM5 84 aaKnown RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 CHST9Q7L1S5 443 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 PELI3Q8N2H9 469 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 RMDN1Q96DB5 314 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 CDKN2AIPNLQ96HQ2 116 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 AARSD1Q9BTE6 412 aaKnown RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 TRPC7Q9HCX4 862 aa16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 INTS10Q9NVR2 710 aaKnown RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 ARIH1Q9Y4X5 557 aaPredicted RBP16.58■□□□□ 0.25
CLMAT3-201ENST00000510576 SEC24AO95486 1093 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 EFEMP2O95967 443 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 HMGA1P17096 107 aaKnown RBP16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 MRPS35P82673 323 aaKnown RBP16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 DSG1Q02413 1049 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 PDAP1Q13442 181 aaKnown RBP16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 ART3Q13508 389 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 ZNF678Q5SXM1 525 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 AFTPHQ6ULP2 937 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 GLT6D1Q7Z4J2 308 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 PGAM4Q8N0Y7 254 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 HIPK4Q8NE63 616 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 PTERQ96BW5 349 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 FAM136AQ96C01 138 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 EXOC2Q96KP1 924 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 EFCAB1Q9HAE3 211 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 STK39Q9UEW8 545 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 SPO11Q9Y5K1 396 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 ANAPC1Q9H1A4 1944 aa16.58■□□□□ 0.24
CLMAT3-201ENST00000510576 A0A1B0GVM2 712 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TCAF2A6NFQ2 919 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 SUPT7LO94864 414 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 UPP2O95045 317 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 KLKB1P03952 638 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 IRF1P10914 325 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CES1P23141 567 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 SGSHP51688 502 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 INHBCP55103 352 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CCL23P55773 120 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ARHGEF6Q15052 776 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TAF1AQ15573 450 aaPredicted RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TAF12Q16514 161 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 IZUMO2Q6UXV1 221 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 RYBPQ8N488 228 aaPredicted RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 EXT2Q93063 718 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CWH43Q9H720 699 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TNFRSF12AQ9NP84 129 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 GKN1Q9NS71 199 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 VPS28Q9UK41 221 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 AGO1Q9UL18 857 aaKnown RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 EIF4E1BA6NMX2 242 aaKnown RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CBX4O00257 560 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TSPAN3O60637 253 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CXCL10P02778 98 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ZNF37AP17032 561 aaPredicted RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CR2P20023 1033 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 KCNC1P48547 511 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 HERVK_113P63132 956 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TIAL1Q01085 375 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 SQLEQ14534 574 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ADGRF1Q5T601 910 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CHSY3Q70JA7 882 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 RAB44Q7Z6P3 723 aaPredicted RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 MICAL1Q8TDZ2 1067 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 CDRT15Q96T59 188 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 DDX50Q9BQ39 737 aaKnown RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ECSITQ9BQ95 431 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 ERVK-6Q9BXR3 956 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TDRD1Q9BXT4 1180 aaKnown RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 VCX3BQ9H321 246 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 WDR41Q9HAD4 459 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 GEMIN8Q9NWZ8 242 aaKnown RBP16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 TRAF6Q9Y4K3 522 aa16.57■□□□□ 0.24
CLMAT3-201ENST00000510576 UBA6A0AVT1 1052 aaPredicted RBP16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 C2orf81A6NN90 581 aa16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 HSPA1BP0DMV9 641 aaKnown RBP16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 ALDH1A3P47895 512 aa16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 PRMT2P55345 433 aa16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 PLD1Q13393 1074 aa16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 CYTH1Q15438 398 aa16.56■□□□□ 0.24
CLMAT3-201ENST00000510576 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms