RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 LRRC52Q8N7C0 313 aa10.61□□□□□ -0.71
NEK1-206ENST00000510533 COX4I2Q96KJ9 171 aa10.61□□□□□ -0.71
NEK1-206ENST00000510533 TEFMQ96QE5 360 aaKnown RBP10.61□□□□□ -0.71
NEK1-206ENST00000510533 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
NEK1-206ENST00000510533 ATXN10Q9UBB4 475 aa10.61□□□□□ -0.71
NEK1-206ENST00000510533 SAMD4AQ9UPU9 718 aaKnown RBP10.61□□□□□ -0.71
NEK1-206ENST00000510533 KCNE2Q9Y6J6 123 aa10.61□□□□□ -0.71
NEK1-206ENST00000510533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 WWP2O00308 870 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 BTN3A3O00478 584 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 SLC9A3R1O14745 358 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 UGT2B11O75310 529 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 MRPS6P82932 125 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 BNIP1Q12981 228 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 DLG2Q15700 870 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ECM1Q16610 540 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 KLHL24Q6TFL4 600 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 DEF8Q6ZN54 512 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 RBFAQ8N0V3 343 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 BRD9Q9H8M2 597 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ADGRE2Q9UHX3 823 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 EFR3BQ9Y2G0 817 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ZW10O43264 779 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 KHDRBS3O75525 346 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 LCA5LO95447 670 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 IFNA16P05015 189 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 HDCP19113 662 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 RPL9P32969 192 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 MSX2P35548 267 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 KCTD19Q17RG1 926 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 SLC25A52Q3SY17 297 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CERCAMQ5T4B2 595 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 HPS6Q86YV9 775 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 HJURPQ8NCD3 748 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 RBM15BQ8NDT2 890 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 C7orf26Q96N11 449 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 SLC9A7Q96T83 725 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ABCG8Q9H221 673 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TBC1D3BA6NDS4 549 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CAPN8A6NHC0 703 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 A8MUI8 341 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 DHX15O43143 795 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 DDNO94850 711 aaPredicted RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 COL6A2P12110 1019 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 GRM5P41594 1212 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 OLR1P78380 273 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 SEMA5AQ13591 1074 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TCEA2Q15560 299 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 SLC1A5Q15758 541 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 BRMS1LQ5PSV4 323 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 OR4A15Q8NGL6 344 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 MCFD2Q8NI22 146 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 PIH1D2Q8WWB5 315 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 EXOC2Q96KP1 924 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 KREMEN1Q96MU8 473 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TDRD1Q9BXT4 1180 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 NEK6Q9HC98 313 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CDH22Q9UJ99 828 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 WBP11Q9Y2W2 641 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 ADM5C9JUS6 153 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CLDN5O00501 218 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 B4GALT5O43286 388 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 CTPS1P17812 591 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 HNF4AP41235 474 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 ARSHQ5FYA8 562 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 IRAK1BP1Q5VVH5 260 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 STRADAQ7RTN6 431 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TOP6BLQ8N6T0 577 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 BCL2L14Q9BZR8 327 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 GLOD4Q9HC38 313 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
NEK1-206ENST00000510533 R3HDM2Q9Y2K5 976 aaKnown RBP10.6□□□□□ -0.71
NEK1-206ENST00000510533 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 CSH1P0DML2 217 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 CSH2P0DML3 217 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 ITGB5P18084 799 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 MMP8P22894 467 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 TGFBR2P37173 567 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 BUD31P41223 144 aaPredicted RBP10.59□□□□□ -0.71
NEK1-206ENST00000510533 AKIRIN2Q53H80 203 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 FAM35AQ86V20 835 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 CPSF7Q8N684 471 aaKnown RBP10.59□□□□□ -0.71
NEK1-206ENST00000510533 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 IL31RAQ8NI17 732 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 FCRL2Q96LA5 508 aaPredicted RBP10.59□□□□□ -0.71
NEK1-206ENST00000510533 PURBQ96QR8 312 aaKnown RBP10.59□□□□□ -0.71
NEK1-206ENST00000510533 COPS8Q99627 209 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
NEK1-206ENST00000510533 OR10H1Q9Y4A9 318 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms