RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HS3ST4Q9Y661 456 aa5.62□□□□□ -1.51
HMGB1P44-201ENST00000508597 ALG6Q9Y672 507 aa5.62□□□□□ -1.51
HMGB1P44-201ENST00000508597 WNT6Q9Y6F9 365 aa5.62□□□□□ -1.51
HMGB1P44-201ENST00000508597 A0A0C4DFX4 3053 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 MACROD2A1Z1Q3 448 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 GRID2IPA4D2P6 1211 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 E9PAM4 449 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 NPC1O15118 1278 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 DCXO43602 365 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 BUB1O43683 1085 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 KIF5CO60282 957 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF189O75820 626 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZRANB2O95218 330 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FKBP9O95302 570 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 MOCS3O95396 460 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CYP17A1P05093 508 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 TYRP14679 529 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZFXP17010 805 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 COMTP21964 271 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SP100P23497 879 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CTNNA2P26232 953 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 GJA4P35212 333 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CTNNA1P35221 906 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SERPINB6P35237 376 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SSR1P43307 286 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 PLK1P53350 603 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATXN1P54253 815 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLURP1P55000 103 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 STARD6P59095 220 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 IRF9Q00978 393 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SIGLEC14Q08ET2 396 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SEMA3BQ13214 749 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 KRT81Q14533 505 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 DMC1Q14565 340 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 EIF4HQ15056 248 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FBXO43Q4G163 708 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC44A4Q53GD3 710 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FBLN7Q53RD9 439 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LY6G5CQ5SRR4 150 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 MANEALQ5VSG8 457 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RAP1GAP2Q684P5 730 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 NADSYN1Q6IA69 706 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FBXL22Q6P050 247 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LHFPL2Q6ZUX7 228 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FKBP9P1Q75LS8 142 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 BZW1Q7L1Q6 419 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 TICRRQ7Z2Z1 1910 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 NT5DC3Q86UY8 548 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRC49Q8IUZ0 686 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 KATNAL2Q8IYT4 538 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF683Q8IZ20 524 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RCOR2Q8IZ40 523 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LGI2Q8N0V4 545 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CCAR2Q8N163 923 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CCDC185Q8N715 623 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRC57Q8N9N7 239 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 KCTD6Q8NC69 237 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 EXD1Q8NHP7 514 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 FIBINQ8TAL6 211 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 WFIKKN2Q8TEU8 576 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CHTF18Q8WVB6 975 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RSAD2Q8WXG1 361 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 CD101Q93033 1021 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RBM41Q96IZ5 413 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SCYL1Q96KG9 808 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF830Q96NB3 372 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RPRD1AQ96P16 312 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 KCNC2Q96PR1 638 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF670Q9BS34 389 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RPP25Q9BUL9 199 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SNRNP25Q9BV90 132 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 BBS2Q9BXC9 721 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 OSBPL6Q9BZF3 934 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SIK2Q9H0K1 926 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LINC00597Q9H2U6 94 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 EBF3Q9H4W6 596 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 DHX35Q9H5Z1 703 aaKnown RBP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 LZTFL1Q9NQ48 299 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 HPS4Q9NQG7 708 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 TMEM248Q9NWD8 314 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 OXSMQ9NWU1 459 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 DEC1Q9P2X7 70 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 PCSK1NQ9UHG2 260 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 VANGL2Q9ULK5 521 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC27A6Q9Y2P4 619 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 B3GALT1Q9Y5Z6 326 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 RAD54BQ9Y620 910 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 DUSP10Q9Y6W6 482 aa5.61□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZDBF2Q9HCK1 2354 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MIA3Q5JRA6 1907 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 FAM170AA1A519 330 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ILVBLA1L0T0 632 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms