RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FHL5Q5TD97 284 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 C1QL3Q5VWW1 255 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 CAPRIN2Q6IMN6 1127 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 LIPIQ6XZB0 460 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 STRADAQ7RTN6 431 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 ZSWIM9Q86XI8 627 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 ZNF354CQ86Y25 554 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 NRROSQ86YC3 692 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 NLGN4XQ8N0W4 816 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 RTL3Q8N8U3 475 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 NETO2Q8NC67 525 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 NLGN4YQ8NFZ3 816 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 KIAA1143Q96AT1 154 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 TUBGCP5Q96RT8 1024 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 LGR4Q9BXB1 951 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 MAGEB5Q9BZ81 275 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 RAB6CQ9H0N0 254 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 WDR26Q9H7D7 661 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 GPN2Q9H9Y4 310 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 TAAR2Q9P1P5 351 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 PDP2Q9P2J9 529 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 APCP25054 2843 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 LOC101059948A0A1B0GTJ6 334 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 WIPF3A6NGB9 483 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PRR19A6NJB7 356 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 DUX1O43812 170 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ECEL1O95672 775 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CLDN1O95832 211 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ELFN1P0C7U0 828 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PRKAR1AP10644 381 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 MYCLP1P12525 358 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CYP11B1P15538 503 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 GM2AP17900 193 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 GNLYP22749 145 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 OAS2P29728 719 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 SDC4P31431 198 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CSF2RBP32927 897 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PTPN9P43378 593 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CSNK1DP48730 415 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 NOMO3P69849 1222 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ILF3Q12906 894 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PEX6Q13608 980 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 RAPGEF1Q13905 1077 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 SEPT6Q14141 434 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CDO1Q16878 200 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 C15orf59Q2T9L4 293 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PARP15Q460N3 678 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CFAP58Q5T655 872 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 AFMIDQ63HM1 303 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 PNCKQ6P2M8 343 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM71Q6P5X7 295 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ZC3H18Q86VM9 953 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 NAGSQ8N159 534 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 EMC1Q8N766 993 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CENPIQ92674 756 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 NTAN1Q96AB6 310 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ECHDC3Q96DC8 303 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 RTP4Q96DX8 246 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 EXOC2Q96KP1 924 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 ZPBPQ9BS86 351 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 TRIT1Q9H3H1 467 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 CARS2Q9HA77 564 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 OCIAD1Q9NX40 245 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 UBA2Q9UBT2 640 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 TP53TG5Q9Y2B4 290 aa9.4□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM184BQ9Y519 407 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 TNRC6AQ8NDV7 1962 aaKnown RBP9.4□□□□□ -0.9
NEDD9-211ENST00000508546 MED13LQ71F56 2210 aa9.4□□□□□ -0.91
NEDD9-211ENST00000508546 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 EFCAB7A8K855 629 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 RASA4BC9J798 803 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PPM1DO15297 605 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 RASA4O43374 803 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 FUCA1P04066 466 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PRKCGP05129 697 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 EPHB2P29323 1055 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 SERPINA4P29622 427 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 MAN1A1P33908 653 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 MLLT10P55197 1068 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 HDAC4P56524 1084 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 GPLD1P80108 840 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 MC2RQ01718 297 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 BIRC2Q13490 618 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 DEFB109BQ30KR1 87 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 ANKS6Q68DC2 871 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 TCTN3Q6NUS6 607 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 DPY19L2P1Q6NXN4 242 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 CEACAM20Q6UY09 585 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms