RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 HNRNPA1P09651 372 aaKnown RBP eCLIP4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 CDH1P12830 882 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 ITGA2P17301 1181 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 GALNT2Q10471 571 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 TAF12Q16514 161 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 CTF1Q16619 201 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 SLC9B1Q4ZJI4 515 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 SLC45A4Q5BKX6 768 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 CPLX2Q6PUV4 134 aaKnown RBP4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 GFRALQ6UXV0 394 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 TAOK1Q7L7X3 1001 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 LINGO2Q7L985 606 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 DSG4Q86SJ6 1040 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 TMEM219Q86XT9 240 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 ZNF34Q8IZ26 560 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 HUS1BQ8NHY5 278 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 GCC1Q96CN9 775 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 KLHL15Q96M94 604 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 UHRF2Q96PU4 802 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 PCYT2Q99447 389 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 FUZQ9BT04 418 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 MMP25Q9NPA2 562 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 GPR108Q9NPR9 543 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 HCN3Q9P1Z3 774 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 RALYQ9UKM9 306 aaKnown RBP4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 DGKBQ9Y6T7 804 aa4.56□□□□□ -1.68
UBE2D3-225ENST00000508476 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 SNAP23O00161 211 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 P2RY10O00398 339 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 MAOAP21397 527 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 MCM3P25205 808 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 MARK3P27448 753 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 SORDQ00796 357 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 RBM39Q14498 530 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 RGMBQ6NW40 437 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 FAM122CQ6P4D5 195 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 CYP26C1Q6V0L0 522 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 QSOX2Q6ZRP7 698 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 OR13A1Q8NGR1 328 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 LRRC8CQ8TDW0 803 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 PLEKHA4Q9H4M7 779 aa4.55□□□□□ -1.68
UBE2D3-225ENST00000508476 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 C16orf97H3BN30 126 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 TMPOP42166 694 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 KRBA2Q6ZNG9 492 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 HAPLN4Q86UW8 402 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 WDR63Q8IWG1 891 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 SPATA6LQ8N4H0 392 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 ABTB1Q969K4 478 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 NDST4Q9H3R1 872 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 PPP1R3EQ9H7J1 279 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 KLHL1Q9NR64 748 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 MCM9Q9NXL9 1143 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 RRN3Q9NYV6 651 aa4.54□□□□□ -1.68
UBE2D3-225ENST00000508476 NTN3O00634 580 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 SEC14L5O43304 696 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 SLC22A3O75751 556 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 ATP1A1P05023 1023 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 CFC1P0CG37 223 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 CETPP11597 493 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 HSD3B1P14060 373 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 COX7A2P14406 83 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 S1PR1P21453 382 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 GLIPR1P48060 266 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 METAP2P50579 478 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 CLCNKAP51800 687 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 HNRNPH2P55795 449 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 RPP30P78346 268 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 DMP1Q13316 513 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 SYT16Q17RD7 645 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 STXBP5Q5T5C0 1151 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 IRAK1BP1Q5VVH5 260 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 RRM2BQ7LG56 351 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 C1orf87Q8N0U7 546 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 USP13Q92995 863 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 KIF1BPQ96EK5 621 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 APOPT1Q96IL0 206 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 CMKLR1Q99788 373 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 PCDH9Q9HC56 1237 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 HINT3Q9NQE9 182 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 TMEM30AQ9NV96 361 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 PADI1Q9ULC6 663 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 A4GNTQ9UNA3 340 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 SCINQ9Y6U3 715 aa4.53□□□□□ -1.68
UBE2D3-225ENST00000508476 SEC31AO94979 1220 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 FTCDO95954 541 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 PAK4O96013 591 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 MYOD1P15172 320 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 BDKRB2P30411 391 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 CORO1AP31146 461 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 PHEXP78562 749 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 TLE2Q04725 743 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 CAMK1Q14012 370 aa4.52□□□□□ -1.69
UBE2D3-225ENST00000508476 GPATCH4Q5T3I0 446 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms