RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 BMPR1BO00238 502 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 TNFSF14O43557 240 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 HNRNPCL1O60812 293 aaKnown RBP4.99□□□□□ -1.61
DHFR-204ENST00000508282 SEC31AO94979 1220 aaKnown RBP4.99□□□□□ -1.61
DHFR-204ENST00000508282 F9P00740 461 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 IGLV2-11P01706 119 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 HNRNPCL4P0DMR1 293 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 DDIT3P35638 169 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 PAFAH1B1P43034 410 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 GABRB2P47870 512 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 GNAQP50148 359 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 METAP2P50579 478 aaKnown RBP eCLIP4.99□□□□□ -1.61
DHFR-204ENST00000508282 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
DHFR-204ENST00000508282 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
DHFR-204ENST00000508282 ARL16Q0P5N6 197 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 KRTAP24-1Q3LI83 254 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SLC45A4Q5BKX6 768 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 FAM69AQ5T7M9 428 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SLC36A4Q6YBV0 504 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 C9orf139Q6ZV77 190 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 USP43Q70EL4 1123 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 TAOK1Q7L7X3 1001 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SLC46A3Q7Z3Q1 461 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 HEATR4Q86WZ0 1026 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SLC25A18Q9H1K4 315 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 MMP25Q9NPA2 562 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 GPR108Q9NPR9 543 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 PDP2Q9P2J9 529 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SLC13A4Q9UKG4 626 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 VDAC3Q9Y277 283 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 PCDHAC2Q9Y5I4 1007 aa4.99□□□□□ -1.61
DHFR-204ENST00000508282 SNAP23O00161 211 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 TIPRLO75663 272 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 UMODP07911 640 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 DGKAP23743 735 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 ABCD1P33897 745 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 ZNF132P52740 706 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 RAD23BP54727 409 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 SORDQ00796 357 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 CTF1Q16619 201 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 PLEKHA7Q6IQ23 1121 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 SMIM29Q86T20 159 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 SPATA6LQ8N4H0 392 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 CADM4Q8NFZ8 388 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 LNX1Q8TBB1 728 aaPredicted RBP4.98□□□□□ -1.61
DHFR-204ENST00000508282 SLC41A2Q96JW4 573 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 NODALQ96S42 347 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 FAM110AQ9BQ89 295 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 PPP1R3EQ9H7J1 279 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 BRF2Q9HAW0 419 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 PCDH9Q9HC56 1237 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 TCF7L2Q9NQB0 619 aa4.98□□□□□ -1.61
DHFR-204ENST00000508282 HINT3Q9NQE9 182 aaKnown RBP4.98□□□□□ -1.61
DHFR-204ENST00000508282 CGNL1Q0VF96 1302 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 CKAP5Q14008 2032 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 GRID2O43424 1007 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 FTCDO95954 541 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 AMD1P17707 334 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 XBP1P17861 261 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 SLC20A2Q08357 652 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 NAE1Q13564 534 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 ALG11Q2TAA5 492 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 HAPLN4Q86UW8 402 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 SFR1Q86XK3 245 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 WDR63Q8IWG1 891 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 ODF3L1Q8IXM7 274 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 OR2AK2Q8NG84 335 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 NFKBIDQ8NI38 313 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 PPM1EQ8WY54 764 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 CD101Q93033 1021 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 AGXT2Q9BYV1 514 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 PAIP1Q9H074 479 aaKnown RBP4.97□□□□□ -1.61
DHFR-204ENST00000508282 NDST4Q9H3R1 872 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 SDF2L1Q9HCN8 221 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 MCM9Q9NXL9 1143 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 ARHGAP26Q9UNA1 814 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 NAALADL1Q9UQQ1 740 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 CRYL1Q9Y2S2 319 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 NOTCH4Q99466 2003 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 UTYO14607 1347 aa4.97□□□□□ -1.61
DHFR-204ENST00000508282 PDS5AQ29RF7 1337 aaKnown RBP4.97□□□□□ -1.61
DHFR-204ENST00000508282 USP17L23D6RBM5 183 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 XPNPEP2O43895 674 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 HOXB5P09067 269 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 HLA-DOBP13765 273 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 DDX5P17844 614 aaKnown RBP4.96□□□□□ -1.62
DHFR-204ENST00000508282 CPOXP36551 454 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 CLCNKAP51800 687 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 FUT6P51993 359 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 HNRNPH2P55795 449 aaKnown RBP4.96□□□□□ -1.62
DHFR-204ENST00000508282 NEXNQ0ZGT2 675 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 TROAPQ12815 778 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 FGFBP1Q14512 234 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 KRT24Q2M2I5 525 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 COL28A1Q2UY09 1125 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 METTL2BQ6P1Q9 378 aaKnown RBP4.96□□□□□ -1.62
DHFR-204ENST00000508282 MEX3BQ6ZN04 569 aaKnown RBP4.96□□□□□ -1.62
DHFR-204ENST00000508282 KRBA2Q6ZNG9 492 aa4.96□□□□□ -1.62
DHFR-204ENST00000508282 FOXL2NBQ6ZUU3 175 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms