RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FAM129AQ9BZQ8 928 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 EPC1Q9H2F5 836 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 ANKRD36A6QL64 1941 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 TOR1BO14657 336 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 STX7O15400 261 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 SEC31AO94979 1220 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 CLDN7O95471 211 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 PAK4O96013 591 aaPredicted RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 LPOP22079 712 aaPredicted RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 ADRA1DP25100 572 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 MAT2AP31153 395 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 HOXD12P35452 270 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 HMGCLP35914 325 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 STC1P52823 247 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 STAT4Q14765 748 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 LRRC14Q15048 493 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 DNAJC21Q5F1R6 531 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 DENND5AQ6IQ26 1287 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 CEP128Q6ZU80 1094 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 TMC3Q7Z5M5 1100 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 NLRP8Q86W28 1048 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 PPHLN1Q8NEY8 458 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 PTCD2Q8WV60 388 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 DNASE2BQ8WZ79 361 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 FAM114A2Q9NRY5 505 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 SAMD15Q9P1V8 674 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 ZFR2Q9UPR6 939 aaKnown RBP20.08■□□□□ 0.81
USP53-203ENST00000507597 SNX24Q9Y343 169 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 HS3ST3A1Q9Y663 406 aa20.08■□□□□ 0.81
USP53-203ENST00000507597 FPGTO14772 594 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 SLC31A1O15431 190 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 RECQL5O94762 991 aaPredicted RBP20.07■□□□□ 0.8
USP53-203ENST00000507597 SLU7O95391 586 aaKnown RBP20.07■□□□□ 0.8
USP53-203ENST00000507597 CREB5Q02930 508 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PTSQ03393 145 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 SRSF5Q13243 272 aaKnown RBP20.07■□□□□ 0.8
USP53-203ENST00000507597 SKIDA1Q1XH10 827 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PCID2Q5JVF3 399 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 SEL1L3Q68CR1 1132 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 DUPD1Q68J44 220 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 ZNF765Q7L2R6 523 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 LYSMD3Q7Z3D4 306 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PDIK1LQ8N165 341 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 CEP76Q8TAP6 659 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 STYXQ8WUJ0 223 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PEX13Q92968 403 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 NUS1Q96E22 293 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 RANBP9Q96S59 729 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 GGT7Q9UJ14 662 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PCDHGA5Q9Y5G8 931 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 R4GN57 208 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 PLXND1Q9Y4D7 1925 aa20.07■□□□□ 0.8
USP53-203ENST00000507597 SDR42E2A6NKP2 422 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SPINT1O43278 529 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 IGHV4-34P06331 123 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 PIRTP0C851 137 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 LHCGRP22888 699 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 IVDP26440 423 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SPINT3P49223 89 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 ITGA8P53708 1063 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 ARL4CP56559 192 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SESN2P58004 480 aaPredicted RBP20.06■□□□□ 0.8
USP53-203ENST00000507597 PPP2CBP62714 309 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 PPP2CAP67775 309 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 OVGP1Q12889 678 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SEPT6Q14141 434 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 TEAD4Q15561 434 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 LAIR1Q6GTX8 287 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 HIBCHQ6NVY1 386 aaPredicted RBP20.06■□□□□ 0.8
USP53-203ENST00000507597 TSPAN33Q86UF1 283 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 CBARPQ8N350 705 aaPredicted RBP20.06■□□□□ 0.8
USP53-203ENST00000507597 DEFB119Q8N690 84 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 DTD2Q96FN9 168 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SERAC1Q96JX3 654 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 COQ10AQ96MF6 247 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 FOXP3Q9BZS1 431 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 TSPYL1Q9H0U9 437 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 MIR1-1HGQ9H1L0 117 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 DPH5Q9H2P9 285 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 FAM83DQ9H4H8 585 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 APPL1Q9UKG1 709 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 RIMKLBQ9ULI2 386 aa20.06■□□□□ 0.8
USP53-203ENST00000507597 SLC4A1P02730 911 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 TPH1P17752 444 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 RPL21P46778 160 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 RACK1P63244 317 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 SEMG2Q02383 582 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 GUCY2DQ02846 1103 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 POU6F1Q14863 301 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 CDKN3Q16667 212 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 DCP2Q8IU60 420 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 SYT12Q8IV01 421 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 CCNJLQ8IV13 435 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 SLC41A1Q8IVJ1 513 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 IFT20Q8IY31 132 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 NOA1Q8NC60 698 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 LRRC39Q96DD0 335 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 SERPINB12Q96P63 405 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 PLEKHG4BQ96PX9 1271 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 NAT9Q9BTE0 207 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms